Haemophilus parainfluenzae: PARA_08270
Help
Entry
PARA_08270 CDS
T01605
Name
(GenBank) RNA polymerase, beta prime subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
hpr
Haemophilus parainfluenzae
Pathway
hpr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hpr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PARA_08270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpr03021
]
PARA_08270
03400 DNA repair and recombination proteins [BR:
hpr03400
]
PARA_08270
Enzymes [BR:
hpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PARA_08270
Transcription machinery [BR:
hpr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PARA_08270
DNA repair and recombination proteins [BR:
hpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PARA_08270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
CBW14934
LinkDB
All DBs
Position
817843..822093
Genome browser
AA seq
1416 aa
AA seq
DB search
MKDLVKFLKAQSKTSEDFDVIKIGLASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCA
RIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELACPVAHIWFLKS
LPSRIGLLLDMPLRDIERVLYFEMYIVTEPGMTDLERGQLLTEEQFLDAEDRWQDEFEAK
MGAEAIQDLLKGIDLEVECEKLREELQETNSETKRKKITKRLKLLEAFQQSGNKPEWMVM
TVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLIAPDIIVRNEKRML
QESVDALLDNGRRGRAITGSNRRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGP
YLHLHQCGLPKKMALELFRPFIYAKLESRGYATTIKAAKKMVEREDAIVWDILAEVIREH
PILLNRAPTLHRLGIQAFEPLLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTLEAQLE
ARALMMSTNNVLSPANGDPIIVPSQDVVLGLYYMTREKVNGKGEGMLLQDPREAEKAYRT
GEAELHSRVKVRITEYVKNEAGEFEEKTTLTDTTIGRAILWMIAPKGMPYSLFNQTLGKK
AISKLINEAYRRLGLKEAVMFADHIMYTGFAYAARSGSSVGIDDMVIPEKKYEIISAAEE
EVAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSQEEVINREGNPEKQASF
NSIFMMADSGARGSAAQIRQLAGMRGLMARPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVAQDLVIVEDDCGTHEGLVMTPLIEGGDEKVPLRELV
LGRVVAEDVYKPGTEEVLIARNTLLDEKLCDVLDANSVDSVKVRSVVTCDTDFGVCAKCY
GRDLARGHLINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKESSVQIKNNGTLH
LANAKFVVNDEGKLVLTSRNTELTVTDEFGRTKEHYKVPYGTVLNKADGQEVSAGETVAN
WDPHTMPVVSEVSGFVKFIDIVDGLTVTRQTDELTGLSSIVVQDVGERATAGKDLRPTIK
LVDAKGNDIFLPETDVIAQYFLPGKAIVSLDDGAEVKVGEPLARIPQESVGTKDITGGLP
RVADLFEARKPKEPAILAEISGIVSFGKETKGKRRLLITPTEGEIYEEMIPKWRQLNVFE
GEMVERGDVISDGAETPHDILRLRGVRAVTEYIVNEVQEVYRLQGVKINDKHIEVIVRQM
LRKAVITKAYDSEFLEGEQVEVARVKIVNRKREAEGKPPVEFERELLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGFAYHQGRHKKRIVDDVVI
KLSEDDEAAIADEFVMTADDATTNLAEMLNMADDAE
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttagttaagtttttaaaagcacaatcaaaaaccagtgaagattttgatgtg
attaaaattgggttagcttctccagacatgatccgttcttggtcatttggtgaagttaaa
aaacctgaaacaatcaactatcgtacgttcaaacctgagcgtgacggtcttttctgtgca
cgtatcttcgggccagtaaaagattacgaatgtttatgtggaaaatataaacgcttaaaa
caccgtggtgtgatttgtgaaaaatgtggtgttgaagtaacacaaactaaagtgcgtcgt
gaacgtatgggccacattgaattggcttgtcctgtggcacacatttggttcttaaaatca
cttccgtcccgtatcggtttattacttgatatgccgttacgtgatattgagcgtgtgctt
tactttgaaatgtacatcgtaaccgaaccgggtatgaccgatttggaacgtggacagtta
ttaactgaagaacaattccttgatgcagaagaccgctggcaagatgaattcgaagcgaaa
atgggtgctgaagcaattcaagatttacttaaaggtattgatcttgaagtggaatgtgaa
aaattacgtgaagagttacaagaaactaactctgaaaccaaacgtaagaaaatcactaaa
cgcttaaaattattagaagctttccaacaatctggtaacaaaccagagtggatggtgatg
actgtattaccagtacttccaccagatttacgtccgttagtaccattagatggtggtcgt
tttgcaacttctgacttgaacgatttatatcgtcgcgtgatcaaccgtaacaaccgttta
aaacgtttattggatttaatcgcaccagatattatcgtgcgtaacgaaaaacgtatgtta
caagaatctgttgatgcgttattagataatggtcgtcgtggtcgtgcgattacggggtct
aaccgtcgtccattgaaatcacttgcggatatgatcaaaggtaaacaaggtcgtttccgt
caaaacttattaggtaaacgtgttgactattcaggccgttctgtaatcactgtaggtcca
tacttgcacttacaccaatgtggtttaccgaagaaaatggcattggaattattccgtccg
tttatctacgcaaaattagaaagccgtggttatgcaactacaatcaaagcggctaagaaa
atggttgagcgtgaagacgcgatcgtttgggatatcttggcagaagttattcgtgagcac
ccaattctattgaaccgtgcaccgacacttcaccgtttaggtatccaagcgtttgaacca
cttctaatcgaaggtaaagcaatccagttacacccacttgtttgtgcagcgttcaacgcg
gacttcgatggtgaccaaatggcggttcacgtcccattaacacttgaagctcagttagaa
gcgcgtgcgttaatgatgtcaaccaacaacgtactttcacctgcaaacggtgatccaatt
atcgttccatcacaagacgtggtgttgggtctttactatatgacccgtgaaaaagtaaac
ggtaaaggtgaaggcatgttattgcaagatccgcgcgaagctgaaaaagcatatcgcaca
ggtgaagcagagttacattctcgcgttaaagtacgtattactgaatatgtgaaaaatgaa
gctggcgaattcgaagagaaaaccacattaaccgacaccactatcggtcgtgcaatctta
tggatgattgcaccaaaaggtatgccttattcattgttcaaccaaacattaggtaaaaaa
gcaatttctaaacttatcaacgaagcttatcgtcgtttaggtttgaaagaagcggtaatg
tttgctgaccatattatgtataccggttttgcttatgctgctcgttcaggttcttctgtg
ggtatcgacgatatggttatcccagagaaaaaatacgaaattatttctgcagcggaagaa
gaagtggcagaaattcaagaacagttccaatctggtcttgtaacagctggcgaacgttat
aacaaagtcatcgatatttgggctgcggcgaatgagcgcgtagcgaaagcgatgatggaa
aacttatctcaggaagaagtaatcaaccgtgaaggtaaccctgagaaacaagcttctttc
aacagtatctttatgatggctgactctggtgcgcgtggttctgcagctcagattcgtcag
ttagcaggtatgcgtggtttgatggcgcgtccagatggttcgatcatcgaaaccccaatt
acagcgaacttccgtgaaggtttgaacgtacttcagtactttatttcaacccacggtgcg
cgtaaaggtttggcggataccgcattaaaaacagcaaactctggttacttaactcgtcgt
ttagttgacgtggcacaagacttagtgatcgttgaagatgactgtggtacacacgaaggc
ttagtcatgactccattaattgaaggtggtgatgagaaagttccacttcgcgaattagtg
ttaggtcgtgttgtagctgaagatgtgtacaaaccaggtacagaagaggtcttaattgca
cgtaacactttattagatgaaaaactttgtgatgtgttagatgcaaactcagtggacagc
gtaaaagtacgttctgttgtaacttgtgatactgacttcggtgtatgtgcgaaatgttac
ggtcgtgacttagcgcgtggtcacctcatcaaccaaggtgaagcagttggtgttatcgct
gctcaatctatcggtgagccaggtacacagttaaccatgcgtacgttccacatcggtggt
gcagcttctgcagcagcgaaagaatctagcgtacaaatcaaaaacaacggtactttacac
cttgctaacgcgaaattcgttgttaatgacgaaggtaaattagttttaacttctcgtaat
actgaattaaccgttacagatgaatttggtcgtacgaaagaacactataaagtgccttac
ggtactgtgttgaataaagcagatggtcaagaagtatcagcgggtgaaacagtagcaaac
tgggatccacataccatgccagttgtctctgaagtatcaggttttgtgaaattcatcgat
atcgtggacggtttaactgtaactcgtcaaacggatgaattaactggtctttcttctatc
gtggtacaagacgtgggtgaacgtgcaactgcaggtaaagatttacgtccaaccatcaaa
ttagttgatgcaaaaggtaacgatatcttcttacctgaaactgacgttattgcacaatac
ttcttaccaggtaaagcaatcgtaagtttagatgacggtgcggaagtgaaagtgggtgaa
ccacttgcacgtattccacaagaatctgtgggtactaaagatattaccggtggtcttcca
cgcgttgctgatttattcgaagcacgtaaaccgaaagagccagcaatcttggctgaaatt
tcaggtatcgtgtccttcggtaaagaaaccaaaggtaaacgtcgcttgttaatcacccca
actgaaggtgaaatctacgaagaaatgattccaaaatggcgtcaactcaacgtatttgaa
ggcgagatggtagaacgtggtgatgtgatttctgatggtgcagagactccacacgatatc
ttacgtttacgtggtgttcgtgctgtaactgaatatatcgtgaacgaagtgcaagaagtt
taccgcttacaaggggtaaaaattaacgataagcacatcgaagtaatcgtacgtcaaatg
ttacgtaaagcagtcatcactaaagcttatgacagcgaattcctcgaaggggaacaagtt
gaagtggctcgcgtgaaaattgtgaaccgtaaacgtgaagcggaaggtaaaccaccagtt
gaattcgaacgtgaattacttggtattaccaaagcgtcattggcgacagaatccttcatt
tctgcggcatcgttccaagaaaccactcgcgtgcttactgaagcagcggtggcgggtaaa
cgtgatgaattacgtggcttgaaagagaacgtaatcgtaggtcgtttaatccctgcaggt
actggttttgcgtatcaccaaggtcgtcataaaaaacgtattgtagatgatgttgtgatt
aaattgtctgaagacgatgaagcagcaattgctgatgaattcgtgatgacagcagatgat
gcaacaactaacttggcagaaatgcttaatatggcagatgatgcagagtaa
DBGET
integrated database retrieval system
