Hydrogenophaga pseudoflava: HPF_07470
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Entry
HPF_07470 CDS
T06073
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hpse
Hydrogenophaga pseudoflava
Pathway
hpse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPF_07470 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpse03019
]
HPF_07470 (pnp)
03016 Transfer RNA biogenesis [BR:
hpse03016
]
HPF_07470 (pnp)
Enzymes [BR:
hpse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HPF_07470 (pnp)
Messenger RNA biogenesis [BR:
hpse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HPF_07470 (pnp)
Transfer RNA biogenesis [BR:
hpse03016
]
Prokaryotic type
tRNA degradation factors
HPF_07470 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
S1_2
Phage_tube
DNA_pol3_a_NI
KhpA-B_KH
aRib
Motif
Other DBs
NCBI-ProteinID:
QBM27517
UniProt:
A0A4P6WVH6
LinkDB
All DBs
Position
1514011..1516140
Genome browser
AA seq
709 aa
AA seq
DB search
MTMFNKVTKTFQWGQHTVRMETGEIARQSSGAVLLDMEGTVVLATVVAKKDAKAGQDFFP
LTVDYLEKSYAAGKIPGSFFKREGRPSEFETLTSRLIDRPIRPLFPDGFFNEVQVVIHTV
SLNPEVDADIAAMIATSAALSISGIPFNGPIGAARVGYINGQYVLNPGQTERQNSQMDLV
VAGTEAAVLMVESEAEQLSEEIMLGAVVFGHEQGNIAIAAINELVRDAGKPEWDWQPPAK
NEPLIAKVEALGKTKLEAAYQIRNKQARTQACREAYAAVMDGLKAEGVEFDSVAVEGLLF
NIEAAIVRGQILAGEPRIDGRDTRTVRAIEIRNSVLPRTHGSALFTRGETQALVIATLGT
DRDAQRIDALSGDFEDRFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALIAALPTK
EDFPYTIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKEGNRFAVL
TDILGDEDHLGDMDFKVAGTTNGITALQMDIKIQGITKEIMQVALAQAKEARMHILGKMQ
EAMGEAKTEISNFAPRLYTMKINPEKIRDVIGKGGATIRALTEETGTQIDIGEDGTITIA
STDGAKAEEAKRRIAEITAEVEVGKVYEGPITKILDFGALVNLLPGKDGLLHISQIAHER
VEKVTDYLKEGQIVKVKVLETDEKGRVKLSMKALLDRNGGGEQAQQQQQ
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgttcaacaaagtcaccaagaccttccagtggggccagcacacggtccggatg
gaaaccggcgaaatcgcccgccagtccagcggcgccgtgctgctcgacatggaaggcacc
gtggtgctggccaccgtcgtggccaagaaggacgccaaggctggccaggactttttccct
ctgaccgtcgactacctcgaaaagtcctacgccgccggcaagattccgggcagcttcttc
aagcgcgaaggccgcccttccgagtttgaaaccctgaccagccgtctgatcgaccgcccg
atccgcccgctgttcccggacggtttcttcaacgaagtccaggtggtcatccacaccgtg
tcgctgaacccggaagtggacgccgacatcgccgccatgatcgccacctcggcggccctg
tcgatttccggcatcccgttcaacggcccgatcggtgctgcgcgcgtgggctacatcaac
ggccagtacgtgctgaaccccggccagaccgagcgccagaacagccagatggatctggtg
gtggccggcaccgaggccgccgtgctgatggtcgagtccgaagccgagcaactgtccgaa
gaaatcatgctgggcgccgtggtgttcggccacgagcagggcaacatcgccatcgccgcc
atcaacgagctggtgcgcgacgccggtaagcccgagtgggactggcagccgccggccaag
aacgagccgctgatcgccaaagtcgaagccctgggcaagaccaagctcgaagccgcttac
cagatccgcaacaagcaggcccgcacccaggcctgccgcgaggcctatgccgccgtgatg
gacggtctgaaggccgagggcgtggagttcgacagcgtggccgtcgaaggtctgctgttc
aacatagaagccgccatcgtgcgtggccagatcctggctggcgagccgcgcatcgacggc
cgcgacacgcgcaccgtgcgcgccatcgagatccgcaacagcgtgctgccgcgcacccac
ggctcggctctgttcacccgcggtgaaacccaggctctggtgatcgccacgctgggcacc
gaccgcgacgcgcagcgcatcgacgcactgtcaggcgacttcgaagaccgcttcatgctg
cactacaacatgcctccgttcgccaccggcgaaaccggtcgcgtgggcagccccaagcgc
cgcgaaatcggccacggccgcctggccaagcgcgcgctgattgccgcgcttccgaccaag
gaagacttcccctacaccatccgtgtggtgtccgaaatcaccgagtccaacggttcttcg
tcgatggcctccgtctgtggcggctgcttggcgctgatggacgccggcgtgccgatgaag
gcgcacgtggccggcatcgccatgggcctgatcaaagaaggcaaccgcttcgcggtgctg
accgacatcctgggggacgaggaccacctcggcgacatggacttcaaggtggccggcacg
accaacggcatcaccgccctgcagatggacatcaagatccagggcatcaccaaggaaatc
atgcaggtcgccctggctcaggccaaggaagcacgcatgcacatcctgggcaagatgcag
gaagccatgggcgaagcgaagacggaaatctccaacttcgcgccgcgcctgtacaccatg
aagatcaacccggagaagatccgcgacgtgatcggcaagggcggcgccaccatccgtgcg
ctgaccgaagagaccggtacccagatcgacatcggcgaagacggcacgatcaccatcgcg
tccaccgacggtgccaaggccgaggaggccaagcgccgcatcgccgagatcacggccgaa
gtggaagtgggcaaggtctatgaaggcccgatcaccaagatcctggacttcggtgctctg
gtcaacctgctgcccggcaaggacggcttgctgcacatcagccagatcgcccacgagcgc
gtcgagaaggtcacggactacctcaaggaaggccagatcgtgaaggtcaaggtgctcgag
accgacgagaagggccgcgtcaagctgtccatgaaggcgctgctggaccgcaatggcggc
ggcgagcaggcccagcaacagcaacagtaa
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