Hydrogenophaga pseudoflava: HPF_23010
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Entry
HPF_23010 CDS
T06073
Symbol
rnaSA
Name
(GenBank) Guanyl-specific ribonuclease Sa
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
hpse
Hydrogenophaga pseudoflava
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpse03019
]
HPF_23010 (rnaSA)
03016 Transfer RNA biogenesis [BR:
hpse03016
]
HPF_23010 (rnaSA)
Enzymes [BR:
hpse01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
HPF_23010 (rnaSA)
Messenger RNA biogenesis [BR:
hpse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HPF_23010 (rnaSA)
Transfer RNA biogenesis [BR:
hpse03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
HPF_23010 (rnaSA)
Prokaryotic type
HPF_23010 (rnaSA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
Motif
Other DBs
NCBI-ProteinID:
QBM30576
UniProt:
A0A4P6X778
LinkDB
All DBs
Position
4821168..4821410
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AA seq
80 aa
AA seq
DB search
MEQIRQGGPFRYEKDGTVFGNREHLLPSQKRGYYREYTVPTPGLRHRGARRIVCGGQQPR
SPDACYYTEDHYSSFRLIVQ
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggagcagatccgccagggtggtccgttccggtatgagaaggacggcaccgtgttcggc
aaccgagagcacctgctgcccagccagaaacggggttattaccgggaatacacagtgccc
acgccggggttgagacaccgcggggccaggcggatcgtgtgcggaggccagcagccacgt
tcgccagatgcctgttattacaccgaggaccactacagcagcttccggctgatcgtgcag
tga
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