Helicobacter pylori 2018: hp2018_0192
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Entry
hp2018_0192 CDS
T01914
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hpw
Helicobacter pylori 2018
Pathway
hpw00260
Glycine, serine and threonine metabolism
hpw00460
Cyanoamino acid metabolism
hpw00630
Glyoxylate and dicarboxylate metabolism
hpw00670
One carbon pool by folate
hpw00680
Methane metabolism
hpw01100
Metabolic pathways
hpw01110
Biosynthesis of secondary metabolites
hpw01120
Microbial metabolism in diverse environments
hpw01200
Carbon metabolism
hpw01230
Biosynthesis of amino acids
hpw01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hpw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
hp2018_0192 (glyA)
09102 Energy metabolism
00680 Methane metabolism
hp2018_0192 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
hp2018_0192 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
hp2018_0192 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
hp2018_0192 (glyA)
Enzymes [BR:
hpw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
hp2018_0192 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
HrcA
Motif
Other DBs
NCBI-ProteinID:
ADZ50868
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Position
183517..184767
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AA seq
416 aa
AA seq
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MAYFLEQTDSEIFEFIFEEFKRQNEHLEMIASENYTFPSVMEAMGSILTNKYAEGYPNKR
YYGGCEVVDKIESLAIERAKKLFNCQFANVQAHSGTQANNAVYHALLKPYDKILGMDLSC
GGHLTHGAKVSLTGKHYQSFSYGVGLDGYIDYEEALKIAQSVKPQIIVCGFSAYPREIDF
KKFREIADEVGALLLGDIAHVAGLVVANEHAHPFPHCHVVSSTTHKTLRGPRGGLILTND
EEIAAKIDKAIFPGTQGGPLMHAIAAKAVGFKENLKPEFKAYAKLVKSNMQVLAKTLKEK
NHKLVSGGTSNHLLLMDFLDKPYSGKDADIALGNAGITVNKNTIPGETRSPFVTSGIRIG
SAALSARGMGAKEFEIIGNKISDILNDINNVSLQLHVKEELKAMANQFPVYHQPIF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcttattttttagaacaaacggatagtgaaatctttgagttcatctttgaagaattt
aaacgtcaaaatgagcatttagaaatgatagcgagcgagaattacacttttcctagtgtc
atggaggctatggggagtattttaacgaataaatacgctgaaggctatcctaacaaacgc
tactatggaggctgtgaagtggtggataaaatagaaagcttagccatagaaagggctaaa
aagcttttcaattgccagttcgctaatgtgcaagcgcattcaggcacacaagccaataac
gctgtctatcacgcccttttaaagccttatgataagattttaggcatggatttaagctgt
ggagggcatttaacgcatggcgctaaagtgagtttaaccggcaagcattatcagagcttt
tcttatggcgtgggtttggatggctatattgattatgaagaggcgctaaaaatcgctcaa
agcgttaagccacaaatcattgtgtgcgggttttcagcctatccaagggagattgatttt
aagaaatttagggaaatcgctgatgaagtgggggcgttactactaggcgatatagctcat
gtggcagggcttgtagtcgctaatgagcatgcccatcctttcccgcattgccatgtggtt
tcaagcaccactcataagactttaagagggcctagaggggggcttattttaaccaatgac
gaagagatagcggctaagattgataaagcgatttttccaggaactcaaggcgggcctttg
atgcatgcgatcgctgctaaagcggtggggtttaaagagaatctcaaaccagagtttaaa
gcttacgcaaaattggtgaaatctaacatgcaagttctcgctaaaacattaaaagaaaaa
aaccacaaattagtgagcggtggcacttctaaccatttgcttttaatggattttttagat
aagccttatagcgggaaagacgctgatattgctttagggaatgctgggatcaccgtgaat
aaaaacaccattcctggtgaaacgcgcagcccttttgtaacgagcgggataaggattggc
tcagcggcattgagcgcaagaggcatgggagctaaagaatttgaaatcatagggaataaa
atatcagatattttgaatgatattaataatgttagtttgcaattgcatgtgaaagaagaa
ttgaaagccatggccaatcaattccctgtgtaccaccaacccattttttaa
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