Helicobacter pylori 83: HMPREF0462_0216
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Entry
HMPREF0462_0216 CDS
T01915
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
hpx
Helicobacter pylori 83
Pathway
hpx00860
Porphyrin metabolism
hpx01100
Metabolic pathways
hpx01110
Biosynthesis of secondary metabolites
hpx01120
Microbial metabolism in diverse environments
hpx01240
Biosynthesis of cofactors
Module
hpx_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
hpx00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
HMPREF0462_0216 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hpx04147
]
HMPREF0462_0216 (hemB)
Enzymes [BR:
hpx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
HMPREF0462_0216 (hemB)
Exosome [BR:
hpx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
HMPREF0462_0216 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
AEE69821
UniProt:
F4D3M6
LinkDB
All DBs
Position
complement(206213..207184)
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AA seq
323 aa
AA seq
DB search
MFKRLRRLRSSENLRAMIRETRLNIDDFIAPLFVIESDNYIKNEINSMPGVYQMSIESLL
KECEELVGLGIKAVLLFGIPKNKDATGSHALNKDHIVAKAAREVKKRFKDLIVIADLCFC
EYTDHGHCGILENASVSNDKTLEILNLQGLILAESGVDILAPSNMMDGNVLSLRKVLDKA
GYFYTPIMSYSTKFASSYYGPFRDVANSAPSFGDRKSYQMDYANKKEALLESLEDEKQGA
DILMVKPALAYLDIVKEIRDHTLLPLALYNVSGEYAMLKLAQKHNLINYESVLLETMTCF
KRAGADMIISYHAKEMANLLQRN
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaacgattgagaagattacgaagcagcgaaaacttaagagcgatgataagagaa
acgcgtctaaacattgatgatttcatcgctcccttatttgtcatagagagcgataattat
attaaaaatgaaatcaactccatgcctggcgtttatcaaatgagtatagagtctctttta
aaagaatgcgaagaattagtgggtttaggcatcaaagccgttttattgtttggcattcct
aaaaataaggacgctacaggaagccatgcgttaaataaggatcatattgtcgcaaaagcc
gctagagaggttaaaaaacgatttaaggatttaatcgttatagcggatttgtgtttttgt
gaatacaccgaccatgggcattgcgggattttagaaaacgcttctgtgtctaacgataaa
acgctagagattttaaaccttcaagggcttattttagctgaaagcggtgtggatattcta
gccccaagcaacatgatggatgggaatgttttaagcttgagaaaagtgctagataaggcc
gggtatttttacacgcccatcatgagctattccactaaatttgcgagcagttactatggg
ccttttagagatgtagcaaactctgcgccgagttttggcgatcgcaaaagctatcaaatg
gattacgctaataaaaaagaagcgcttttagaaagtttagaagatgaaaaacagggcgcg
gatattttaatggtgaaaccggctttggcgtatttggatattgttaaagaaattagagat
cacactttgctccctttagcgctctataatgtgagtggggaatacgccatgctcaaactc
gctcaaaaacacaacctgatcaactatgaaagcgttttattagaaacgatgacttgtttt
aaaagagcgggagcggatatgattattagctatcatgctaaagaaatggctaacttatta
caaaggaattga
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