KEGG   Helicobacter pylori 83: HMPREF0462_0717Help
Entry
HMPREF0462_0717   CDS       T01915                                 

Gene name
gatB
Definition
(GenBank) aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
hpx  Helicobacter pylori 83
Pathway
hpx00970  Aminoacyl-tRNA biosynthesis
hpx01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:hpx00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HMPREF0462_0717 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:hpx03029]
    HMPREF0462_0717 (gatB)
Enzymes [BR:hpx01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     HMPREF0462_0717 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     HMPREF0462_0717 (gatB)
Mitochondrial biogenesis [BR:hpx03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    HMPREF0462_0717 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey VAPB_antitox HcyBio
Motif
Other DBs
NCBI-ProteinID: AEE70322
UniProt: F4D5P7
LinkDB All DBs
Position
692855..694282
Genome map
AA seq 475 aa AA seqDB search
MMPFEAVIGLEVHVQLNTKTKIFCSCSTSFGESPNSNTCPVCLGLPGALPVLNKEVVKKA
IQLGTAIEANINQYSIFARKNYFYPDLPKAYQISQFEVPIVSDGKLEIDTKEGAKIVRIE
RAHMEEDAGKNIHEGSHSLVDLNRACTPLLEIVSKPDMRNSEEAIAYLKKLHAIVRFIGI
SDANMQEGNFRCDANVSIRPKGDEKLYTRVEIKNLNSFRFIAKAIEYEIDRQSVAWESGR
YNEEVVQETRLFDTNKGITLSMRNKEESADYRYFKDPDLYPVFIDEKLLKEAQKINELPS
AKKIRYMKDFNLKEDDANLLVSDPLLAEYFESMLNLGVKAKTSVTWLCVELLGRLKAEIT
LENCGVSAHMLGALAKRIDEGKISGKSAKDVLDRLLEEQGGDVDALIEQMGLSQVNDTEA
IIKVIEEVLKNNADKVLEYKSGKDKLFGFFVGQAMKNLKGANPGVVNAILKEKLD
NT seq 1428 nt NT seq  +upstreamnt  +downstreamnt
atgatgccatttgaagctgtaatcgggctagaagtccatgtccaactcaacaccaaaacc
aaaatcttttgctcttgctctacaagctttggagaatcccctaattctaacacctgccct
gtgtgtttgggcttaccgggagctttgccggtattgaataaagaagtggttaaaaaagcc
atccaattaggcacagccattgaagccaacattaaccaatattccatttttgcgaggaaa
aattatttttaccctgatttgcctaaggcttatcaaatttcgcagtttgaagtccctatt
gtgagcgatgggaaattagagattgacactaaagagggtgcaaaaatcgtgcgtattgaa
agagcccacatggaagaagacgctggtaaaaatatccatgagggcagccattctttagtg
gatttgaaccgtgcttgcacccctttattagaaattgtcagtaagccggacatgcgaaat
agtgaagaagccatagcgtatttgaaaaagctccatgctatcgtgcgttttatagggatt
tctgatgcgaacatgcaagaggggaatttcaggtgcgatgcgaatgtatccattagaccc
aaaggcgatgaaaagctttacacgagggtggagattaaaaacttaaatagctttagattc
atcgctaaagcgattgaatacgaaatagatcgccaaagcgtggcgtgggaaagcgggcgt
tataatgaagaagtggttcaagaaacgcgcctttttgacaccaataaagggatcaccctt
tctatgcgcaataaagaagaatcagcggattaccgctattttaaagatccggatttgtat
cctgtttttattgatgaaaaacttttaaaagaagctcaaaagatcaatgaattgcctagc
gcgaaaaaaatccgctacatgaaagattttaaccttaaagaagacgatgcgaatttattg
gtgagcgatcctttattggcagagtattttgaaagcatgctcaatcttggggttaaggct
aaaacgagcgtaacatggctttgcgtggaattattagggcgcttgaaagccgaaatcact
ttagaaaattgcggagttagcgctcacatgttaggtgctttagccaaacgcattgatgag
ggcaagatttctggcaagagcgctaaagatgtgctagacaggcttttagaagagcaaggg
ggcgatgtggatgcgctcattgaacaaatgggcttgtctcaagtcaatgacaccgaagcg
attattaaagtgatagaagaagtgcttaaaaacaacgctgataaggtgcttgaatacaaa
agcggtaaggacaagctttttgggttttttgtggggcaggcgatgaaaaatttaaaaggc
gctaatcctggcgtggtgaatgctattttgaaagagaaattggattga

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