Helicobacter pylori oki898: HPOKI898_03360
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Entry
HPOKI898_03360 CDS
T03729
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
hpyj
Helicobacter pylori oki898
Pathway
hpyj00470
D-Amino acid metabolism
hpyj00550
Peptidoglycan biosynthesis
hpyj01100
Metabolic pathways
hpyj01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hpyj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPOKI898_03360
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPOKI898_03360
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HPOKI898_03360
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpyj01011
]
HPOKI898_03360
Enzymes [BR:
hpyj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HPOKI898_03360
Peptidoglycan biosynthesis and degradation proteins [BR:
hpyj01011
]
Precursor biosynthesis
Amino acid ligase
HPOKI898_03360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
GARS_A
ATPgrasp_TupA
RimK
Motif
Other DBs
NCBI-ProteinID:
AHN44788
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All DBs
Position
complement(660497..661567)
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AA seq
356 aa
AA seq
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MQSFLGSLIVEFCVLFGGASFEHEISIVSAIALKGVLKDRIKYFIFLDENHHFYLIEESN
MHSKYFAQIKEKKLPPLILTHNGLLKNSFLGAKIIELPLVINLVHGGDGEDGKLASLLEF
YRIAFIGPRIEASVLSYSKYLTKLYAKDLGVKTLDYVLLNEKNRANALDLIGFNFPFIVK
PSNAGSSLGVSVVKEEKELIYALDSAFEYSKEVLIEPFIQGVKEYNLAGCKIKKDFCFSY
IEEPNKQEFLDFKQKYLDFSRTKAPKANLSNAIEEQLKENFKKLYNDLFDGAIIRCDFFV
IENEVYLNEINPIPGSLANYLFDDFKTTLENLAQSLPKTPKIPIKNSYLLQIQKNK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
ttgcaatcgtttttagggagtttgatcgtggagttttgcgttttatttggtggggcgagt
tttgagcatgaaatcagcattgtgagtgcgatcgcgcttaaaggagtgttaaaagacagg
attaaatattttatttttttagatgaaaaccatcatttttatttgattgaagaatccaac
atgcattcaaaatacttcgctcaaatcaaagaaaaaaaattaccccccctaatcctcaca
cacaatggcttgcttaaaaactcgtttttaggggctaagattatagaattgcctttagtg
atcaatctcgtgcatgggggcgatggcgaagacgggaaattagcgagcttgttagaattt
tatcgtatcgcttttataggccctaggattgaagcgagcgtgttgagttatagcaaatat
ttaaccaagctttatgccaaagatttaggggtgaagactttagattatgttcttttgaat
gaaaaaaaccgcgctaacgccttggatttgattgggtttaatttccctttcattgtgaaa
cccagtaacgccggaagctctttaggagtgagcgttgtgaaagaagaaaaagaattgatt
tacgctttagacagtgcgtttgaatattctaaagaagttttaatagagcctttcattcag
ggcgtgaaagaatacaatttagccggctgtaagatcaaaaaggatttttgtttttcctat
attgaagagcctaacaaacaggaatttttagatttcaaacaaaaatatttggatttttca
cgcaccaaagcccctaaagcgaatctttctaacgccatagaagagcaattgaaagaaaac
tttaaaaaactctataacgatttgtttgatggcgcgatcattcgttgcgatttttttgtc
atagaaaatgaagtgtatcttaatgagatcaatcccattcctggcagtttggccaattat
ttgtttgatgattttaaaacaacgctagaaaatttagcgcaatcattacccaaaacccct
aaaatcccaatcaaaaactcttatttgttgcaaatccaaaagaataagtaa
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