Helicobacter pylori OK113: HPOK113_0260
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Entry
HPOK113_0260 CDS
T02510
Symbol
oppD
Name
(GenBank) oligopeptide permease ATPase protein
KO
K13896
microcin C transport system ATP-binding protein
Organism
hpyo
Helicobacter pylori OK113
Pathway
hpyo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hpyo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HPOK113_0260 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hpyo02000
]
HPOK113_0260 (oppD)
Transporters [BR:
hpyo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
HPOK113_0260 (oppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
oligo_HPY
AAA_16
AAA_29
nSTAND1
AAA_22
nSTAND3
AAA_13
DUF87
Sigma54_activat
RsgA_GTPase
MMR_HSR1
NACHT
P-loop_TraG
FtsK_SpoIIIE
AAA_15
Dynamin_N
Cytidylate_kin
AAA_23
G-alpha
IstB_IS21
AIG1
Gtr1_RagA
Motif
Other DBs
NCBI-ProteinID:
BAM96168
LinkDB
All DBs
Position
complement(263806..265356)
Genome browser
AA seq
516 aa
AA seq
DB search
MLEIKNLNCVLNAHFSLQNINISLNPSERVAIVGESGSGKSSIANIIMRLNPRFKPHNGE
VLFETTNLLKESEEFMQHLRGNAIAYIAQDPLSSLNPLHKISKQMSEAYFLHHKNASKTL
LKEKVLNAMQQVQLDEKFLNRYPYELSGGQRQRVCIAMGIINAPKLLICDEPTTALDAQI
QNQILDLLKQLSVEKNIALLFISHDLKAVKRLADRVYVLKKGEIVETNSTKELFNDPKHE
YSKLLLQASNLPAKNLKALDETLLEVKDFSVYYLQKRFFRPSLKKPLIASVNFSLKAKEN
IGIIGESGSGKSSLALGLLKLALNSGEEKILGQSVGLLNSKAFKPYRKILQMVFQDPYAS
LNPRLSIQSILTEALRFAYPKASKKEWHHLAKLCLEEVCLNPELLNFYAYELSGGERQRV
AIARAIALKPKIILLDEPTSALDKSIQKSVLELLLDLQEKQDLSYLFISHDLDVIKAFCD
KVLVISEGKVVEMGAIKEVFDNPKHAYTKRLLESRL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgctagaaatcaaaaacttaaactgcgttttaaacgcgcatttttcgctccaaaacatc
aatatttcgttaaatcctagcgaaagggtggcgatcgtgggcgagagcgggagtgggaaa
agctctatcgctaatatcatcatgcgtttaaaccctagattcaagccccataatggggag
gtgttgtttgaaacaaccaatcttttaaaagaaagcgaagaatttatgcagcatttaagg
ggtaatgcgatagcctacatcgctcaagaccccctatccagcctaaaccccttgcataaa
atcagcaagcaaatgagtgaagcctattttttacaccataaaaacgcttctaaaacgctc
cttaaagaaaaagttttaaacgccatgcaacaagtccaattagatgaaaaatttttaaat
cgttacccttatgaattgagtggagggcagcgccaaagggtgtgtatcgctatgggcatt
attaatgcacccaaactgctcatttgcgatgagcctaccaccgcattagatgcgcaaatc
caaaaccagattttggacttgctcaagcaattgagcgtggaaaaaaacatcgccctttta
ttcattagccatgatttgaaagcggtcaaacgcttggctgatagggtttatgtgctaaaa
aaaggcgagatagtagaaaccaattccactaaagagctttttaatgaccccaagcacgaa
tattcaaaactcctacttcaggcttcaaacttgcccgctaaaaatttaaaagcgctagat
gagacgcttttagaagtgaaagattttagcgtttattacttgcaaaaacgcttctttagg
ccttctttaaaaaaaccccttatcgcatcagtcaatttctccctcaaagctaaagaaaat
atcggcatcattggcgaaagcgggagcgggaaaagctctttagcgttagggcttttaaaa
ctcgctttaaatagcggggaagaaaagattttaggccaaagcgtggggcttttaaattct
aaggcgttcaaaccctaccgcaagattttgcaaatggtgtttcaagacccttacgcatcg
ttaaaccctcgcttaagcattcaaagcattttaacagaagctttgcgctttgcttacccc
aaagcttccaaaaaagaatggcaccatctcgcaaaactttgtttagaagaagtgtgttta
aaccctgaattgcttaacttttacgcttatgaactcagcggtggggagcgccaaagagtg
gcgatcgctagagcgattgctttaaaacctaaaatcattcttttagatgagcccacttct
gctttagataaaagcattcaaaaaagcgtgttggaattgttgttggatttacaagaaaag
caggatttgagctatttgtttatcagccatgatttagatgtgatcaaagcgttttgcgat
aaggtgttagtgataagtgaggggaaagtcgtagaaatgggcgccattaaagaggtgttt
gacaaccctaaacacgcttatacgaagcgtttgttggaatccaggctttaa
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