Helicobacter pylori OK113: HPOK113_0676
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Entry
HPOK113_0676 CDS
T02510
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
hpyo
Helicobacter pylori OK113
Brite
KEGG Orthology (KO) [BR:
hpyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpyo03019
]
HPOK113_0676 (rnc)
03009 Ribosome biogenesis [BR:
hpyo03009
]
HPOK113_0676 (rnc)
03036 Chromosome and associated proteins [BR:
hpyo03036
]
HPOK113_0676 (rnc)
Enzymes [BR:
hpyo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HPOK113_0676 (rnc)
Messenger RNA biogenesis [BR:
hpyo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HPOK113_0676 (rnc)
Ribosome biogenesis [BR:
hpyo03009
]
Eukaryotic type
90S particles
RNase
HPOK113_0676 (rnc)
Prokaryotic type
rRNA processing factors
HPOK113_0676 (rnc)
Chromosome and associated proteins [BR:
hpyo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HPOK113_0676 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
BAM96584
LinkDB
All DBs
Position
724259..724978
Genome browser
AA seq
239 aa
AA seq
DB search
MKNKRSQNSPYVTPNSSYIMLEKALGYSFKDKRLLEQALTHKSCKLALNNERLEFLGDAV
LGLVIGELLYHKFYQYDEGKLSKLRASIVSAHGFTKLAKVIALQDYLRVSSSEEISKGRE
KPSILSSAFEALMAGVYLEAGLAKVRKIMQNLLNRAYKRLDLEHLFMDYKTALQELTQAQ
FCVIPTYQLLQEKGPDHHKEFEMALYIQDKMYATAKGKSKKEAEQQCAYYALQKLKEAK
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaaacgctctcaaaatagcccttatgtaacgcctaatagctcttatataatg
ctagaaaaagctttagggtattcttttaaagacaagcgtttattggagcaagccttaacg
cataaatcatgcaagctcgctttaaacaatgagcgcttggagtttttgggcgatgcggta
ttgggtttggtgataggggagttgctataccataaattctatcaatacgatgaaggcaaa
ctctctaaattaagggcttctattgtgagcgcgcatggttttactaaattagcgaaagtg
atcgctttacaggattatttgcgcgtttcttcttctgaagaaatttctaaagggagagaa
aaaccctctattctgtcaagcgcttttgaggctttaatggccggggtgtatttagaagcg
gggttagctaaggtgcgcaaaatcatgcaaaatttactcaatcgcgcttacaagcgtttg
gatttggagcatttgtttatggactataaaaccgctttacaggaattgacccaagcgcaa
ttttgcgtgatccccacttaccaattgctccaagaaaaagggccagaccatcataaagaa
tttgaaatggctctatacattcaagataaaatgtatgcgaccgctaaaggcaaaagtaaa
aaagaagccgaacagcaatgcgcttattatgcgcttcaaaaacttaaggaagccaaatga
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