Helicobacter pylori 52: HPKB_0220
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Entry
HPKB_0220 CDS
T01898
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
hpz
Helicobacter pylori 52
Pathway
hpz00300
Lysine biosynthesis
hpz01100
Metabolic pathways
hpz01120
Microbial metabolism in diverse environments
hpz01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hpz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HPKB_0220 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hpz01002
]
HPKB_0220 (dapE)
Enzymes [BR:
hpz01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
HPKB_0220 (dapE)
Peptidases and inhibitors [BR:
hpz01002
]
Metallo peptidases
Family M20
HPKB_0220 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
ACX98837
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All DBs
Position
complement(224179..225330)
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AA seq
383 aa
AA seq
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MDALEITQKLISYPTITPKECGIFEYIKSLFPTFKTLECGENGVKNLFLYRIFNPPKEHT
EEKHAKENVKPLHFCFAGHIDVVPPGNHWQSDPFKPIVKEGFLYGRGAQDMKGGVGAFLS
ASLNFNPKTPFMLSVLLTSDEEGPGIFGTRLMLEKLKEKDLLPHMAVVAEPTCEKVLGDS
IKIGRRGSINGKLILKGVQGHAAYPQKCQNPIDALASVLPLISGVHLDDGDEYFDPSKLV
ITNLHAGLGANNVTPASVEVIFNARHSLKTTKESLKEYLEKVLKSTPYTLELESSSSPFI
TASHSKLASVLKENILKTCHATPLLNTKGGTSDARFFSAHGIEVVEFGVINDRIHAIDER
VSLKELELLEKVFLGVLENLSEK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggacgctttagaaatcacccaaaagctcatcagctaccccaccatcacgcccaaagaa
tgcggtatttttgaatacattaaatcgctttttcctacttttaaaactctagagtgtggg
gaaaatggcgtgaaaaacctttttttataccgcatttttaacccccctaaagagcataca
gaagaaaagcatgcaaaagaaaatgttaagcccttgcatttttgctttgcagggcatatt
gatgtcgtgcctcctggaaatcattggcaaagcgatccctttaaacccattgttaaagag
gggtttttatacggccgtggggcgcaagacatgaaagggggcgtgggggcgtttttgagc
gcgagtttaaattttaaccctaaaacccctttcatgctttctgttttactcacaagcgat
gaagaagggccagggatttttggcactaggcttatgttagaaaaactcaaagaaaaagat
ttgctccctcacatggcggttgtggctgaacccacttgcgaaaaagtcctaggcgatagc
atcaaaatcggccgaagaggctctattaatggcaaactcattttaaaaggcgttcaaggg
catgcggcttacccgcaaaaatgccaaaaccccattgatgcgctcgcttctgttttgccc
ttgatttcaggagtccatttagacgatggcgatgaatattttgacccttcaaaattagtc
atcaccaacttgcatgcagggttaggggctaataatgtaacgcccgcaagcgtagaagtc
atttttaatgcgcgccattctttaaaaaccaccaaagaaagtttgaaagaatatttagaa
aaggttttaaaaagcactccttacactttagaattagaatcaagcagttcgcctttcatc
acggcttctcattcaaagcttgccagcgttttaaaagaaaatattttaaagacatgccat
gccaccccccttttaaacaccaaaggcggcacgagcgatgcacgattttttagcgctcat
ggcatagaagtggtagaatttggcgtcattaatgacaggatccatgccattgatgaaagg
gtgagcttgaaagaattagagcttttagaaaaagtgtttttgggggttttagagaatttg
agcgagaaatag
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