Haloplanus rallus: EI982_12815
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Entry
EI982_12815 CDS
T06334
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hra
Haloplanus rallus
Pathway
hra03410
Base excision repair
hra03430
Mismatch repair
hra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EI982_12815
03430 Mismatch repair
EI982_12815
03440 Homologous recombination
EI982_12815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hra03400
]
EI982_12815
DNA repair and recombination proteins [BR:
hra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EI982_12815
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EI982_12815
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EI982_12815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
DUF6003
Motif
Other DBs
NCBI-ProteinID:
QGX95612
UniProt:
A0A6B9F812
LinkDB
All DBs
Position
complement(2230550..2231983)
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AA seq
477 aa
AA seq
DB search
MTGPVPELAERAATCADRLRTADSVLLASHIDADGLTSAAVAATALERAGVPFETVFEKQ
LDEAAVRRMAATDHDTVLFTDFGSGQLDVIAGFEGRGAFVPVIADHHQPADATTTYHLNP
LLVGIDGASELSGAGAAYVLARALEADGVDNRDLAALAVVGAVGDMQGGVDGLTGANGGI
VAEGVAAGVLGEGTDLAMYGRQTRPLPKLLQYASDVRIPGITGDEAGAVEFLAGLDADLR
GDGEWKRWVDLTDDDRRTVASALLKRAVASGVPADRVDDLIGTTYTLTAESEGTELRDVS
EFSTLLNATARYERADVGLAVCLGDRGAALERARTLLRNHRRNLSNGLELVKSEGVTVEG
NVQWFDAGGRIRETIVGIVAGMALGADGIRRDLPIVAFASVEPSAEGEGPEERKVSARGS
HALVREGLDLSAVMREAARSVGGDGGGHDVAAGATIPADERAAFVEAVDRLVGEQLG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtcccgtaccggaactcgccgagcgcgcggcgacgtgtgccgaccggctccgg
accgcggactcggtgttgctcgcctcccacatcgacgcggacggcctgacgagcgccgcc
gtcgccgcgacggcgctggagcgcgcgggcgttcccttcgagacggtcttcgagaagcaa
ctcgacgaggcggcggtccggcggatggcggcgaccgaccacgacaccgtcctcttcacc
gacttcgggagcggccaactcgacgtgatcgccggcttcgaggggcggggcgcgttcgtc
ccggtgatcgccgaccaccaccagccggccgacgcgacgacgacctaccatctgaacccc
ctgctcgtggggatcgacggcgcgagcgaactgtcgggggcgggggcggcgtacgtcctc
gcacgcgcgctcgaagccgacggggtcgacaaccgcgacctcgcggcactggcggtcgtc
ggcgccgtcggcgacatgcagggcggagtcgacggcctgaccggcgccaacgggggaatc
gtcgccgaaggggtcgcggcgggcgtcctcggcgagggcacggacctggcgatgtacggc
cgacagacccgcccgctcccgaaactgctccagtacgcgagcgacgtgcggatcccgggg
atcacgggcgacgaggccggcgcggtcgagttcctcgcggggctggacgccgacctccgg
ggggacggcgagtggaagcggtgggtcgacctcaccgacgacgaccggcggacggtcgcg
agcgccctgctcaagcgggcggtcgcgagcggcgtgcccgccgaccgcgtcgacgacctg
atcgggacgacctacacgctcaccgccgagagcgagggcaccgaactgcgcgacgtgagc
gagttctcgacgctcctgaacgcgacggcgcggtacgagcgcgcggacgtcgggctcgcg
gtctgtctcggcgaccgcggggcggccctggagcgcgcccggacgctcctccggaaccac
cgccggaacctctcgaacgggctggagctggtgaaatcggagggggtcacggtcgaggga
aacgtccagtggttcgacgcgggcgggcggatcagggagaccatcgtcggcatcgtcgcc
gggatggccctcggggccgacgggatccgtcgcgacctgccgatcgtcgccttcgcgagc
gtcgagccgtcggcggagggtgaggggcccgaggaacggaaggtctcggcccgcggctca
cacgcgctggtccgggaggggctcgacctctcggcggtcatgcgcgaggccgcgcggtcc
gtcgggggtgacggcggcggccacgacgtcgccgcgggggcgaccatccccgcggacgag
cgggcggcgttcgtcgaggccgtcgaccgcctcgtgggcgaacagctcgggtag
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