Herbaspirillum rubrisubalbicans: Hrubri_0001
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Entry
Hrubri_0001 CDS
T04238
Symbol
dnaA
Name
(GenBank) chromosomal replication initiator protein
KO
K02313
chromosomal replication initiator protein
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Hrubri_0001 (dnaA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hrb03032
]
Hrubri_0001 (dnaA)
03036 Chromosome and associated proteins [BR:
hrb03036
]
Hrubri_0001 (dnaA)
DNA replication proteins [BR:
hrb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Hrubri_0001 (dnaA)
Chromosome and associated proteins [BR:
hrb03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Hrubri_0001 (dnaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DnaA
Bac_DnaA_C
DnaA_N
IstB_IS21
AAA
Arg_tRNA_synt_N
AFG1_ATPase
AAA_22
ATPase_2
TsaE
AFP_2
Motif
Other DBs
NCBI-ProteinID:
ALU87235
UniProt:
A0A0U3LCJ5
LinkDB
All DBs
Position
1..1404
Genome browser
AA seq
467 aa
AA seq
DB search
MENFWQACSHKLEQELTPQQYSAWIKPLVPLDFEDGLLRIAAPNRFKLDWVKTQFANRIT
ALACEYWDAPTEVQFVLDPRGNQGRRPATANAQANGGGANGLGLPNHEQLHLDPEPAQPV
RAVAPRQEQSRINPVLTFDNLVTGKANQLARAAATQVANNPGTSYNPLFLYGGVGLGKTH
IIHAIGNQVLVDNPGAKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLDLLLIDDIQFF
GGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEISGMDDRLISRFDSGLTVAIEPPELE
MRVAILMKKASAEDVVLSDDVAFFVAKHLRSNVRELEGALRKILAYSRFHGKDITIDVVK
EALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIAMYLAKELTQK
SLPEIGDLFGGRDHTTVLHAVRKIAADRAKSPECNHELHVLEQTLKG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacttctggcaagcctgctcccacaaacttgagcaggagttgacgcctcagcaa
tacagcgcctggatcaagccgctggtgccgctcgacttcgaagacgggctgctgcgcatt
gccgcacccaatcgcttcaagctggactgggtcaagacccagttcgccaaccgcatcacg
gcgctggcctgcgaatactgggacgcccccaccgaagtgcagttcgtgctggacccgcgc
ggcaaccagggccgccgcccggccaccgccaatgcgcaagccaatggcggtggcgccaat
ggcctgggcttgcccaaccacgaacaattgcacctggacccggaaccggcccagccggtg
cgcgcggtcgccccgcgccaggaacagtcgcgcatcaacccggtgctgaccttcgacaac
ctggtcaccggtaaggccaaccagctggcgcgcgccgccgccacccaggtggccaacaat
cccggcacctcgtataacccgctgttcctgtatggcggcgtgggtctgggtaagacccac
atcatccatgccatcggcaatcaggtgcttgtggataacccgggcgccaagatccgctat
atccacgccgagcaatacgtgcgcgacgtggtcacggcctaccagcgcaagggctttgac
gacttcaagcgttattaccactcgctggacctgctgctgatcgacgatattcaattcttc
ggcggcaagagccgcacccaggaagaattcttctatgccttcgaagccctgatcgcggcc
aagaagcagatcatcatcaccagtgatacctatcccaaggaaatcagcggcatggatgac
cgcctgatctcccgcttcgactccggcctgacggtggccatcgagccgcccgagctggag
atgcgggtggcgatcctgatgaagaaggcctcggccgaagacgtggtgctgtccgatgat
gtggccttcttcgtggccaagcacctgcgttccaacgtgcgcgagctggaaggcgcgctg
cgcaagatcctggcctactcgcgtttccacggcaaggacatcaccatcgacgtggtcaag
gaagccctgaaggacttgctgtcggtgcagaaccgccagatctcggtggaaaacatccag
aagacggtggccgacttcttcaacatcaaggtcgccgacatgtattccaagaagcgcccg
gccaacatcgcccgcccgcgccagatcgccatgtacctggccaaggaactgacccagaag
agcctgccggaaatcggcgacctcttcggtgggcgcgaccacaccaccgtgctgcacgcg
gtgcgcaagatcgccgccgaccgcgccaagagcccggaatgcaaccacgagctgcacgtg
ctggagcaaaccctgaagggctga
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