Herbaspirillum rubrisubalbicans: Hrubri_0111
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Entry
Hrubri_0111 CDS
T04238
Symbol
tufB
Name
(GenBank) GTPase translation elongation factor TU (EF-Tu) protein
KO
K02358
elongation factor Tu
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
hrb03012
]
Hrubri_0111 (tufB)
03029 Mitochondrial biogenesis [BR:
hrb03029
]
Hrubri_0111 (tufB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hrb04147
]
Hrubri_0111 (tufB)
Translation factors [BR:
hrb03012
]
Eukaryotic type
Elongation factors
Hrubri_0111 (tufB)
Prokaryotic type
Hrubri_0111 (tufB)
Mitochondrial biogenesis [BR:
hrb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
Hrubri_0111 (tufB)
Exosome [BR:
hrb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Hrubri_0111 (tufB)
Exosomal proteins of breast cancer cells
Hrubri_0111 (tufB)
Exosomal proteins of colorectal cancer cells
Hrubri_0111 (tufB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ALU87341
UniProt:
A0A0U3KW54
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All DBs
Position
127822..129012
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AA seq
396 aa
AA seq
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MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEAKAYDQIDAAPEEKARG
ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI
LLSRQVGVPYIIVFLNKADMVDDEELLELVEMEVRELLSKYEFPGDDLPIVKGSAKLALE
GDTGPLGEQAIMALAEALDTYIPTPERAVDGTFLMPVEDVFSISGRGTVVTGRVERGIIK
VGEEIEIVGIADTQKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVQRGQVLAKPGS
IKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGAIELPKDKEMVMPGDNVS
ITVQLINPIAMEEGLRFAIREGGRTVGAGVVAKIFD
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaggcaagtttgaacggaccaagccgcacgtgaacgtcggcaccatcggtcac
gttgaccacggcaagaccaccctgaccgctgcaatcgcaaccgttctgtcgaagaagttc
ggcggcgaagcgaaggcctacgaccagatcgacgcagcgcctgaagaaaaggcccgcggc
atcaccatcaacaccgcgcacgtcgaatacgaaaccgcgaaccgtcactacgcgcacgtt
gactgcccaggccacgccgactatgtgaagaacatgatcaccggcgcagcccagatggac
ggcgcgatcctggtgtgctcggccgctgacggcccgatgccccagacccgcgaacacatc
ctgctgtcgcgccaagttggcgttccttacatcatcgtcttcctgaacaaggctgacatg
gtggatgacgaagagctgctggaactggtggaaatggaagtccgtgaactgctgtcgaag
tacgagttccctggcgacgacctgcccatcgtgaagggttcggccaagctggcgctggaa
ggcgacaccggtcccctgggcgagcaagccatcatggccctggcagaagccctggacacc
tacatcccgaccccggaacgtgccgttgacggtaccttcctgatgccggtggaagacgtg
ttctcgatctccggccgtggcaccgtggtgaccggtcgcgttgagcgcggcatcatcaag
gtcggcgaagaaatcgaaatcgtcggtatcgctgacactcagaagaccacctgcaccggc
gtggaaatgttccgcaagctgctggaccaaggtcaagctggcgacaacgttggcgtgctg
ctgcgtggcaccaagcgtgaagacgtgcagcgtggccaagttctggccaagccgggttcg
atcaagccgcacaagcacttcaccggcgagatctatgttctgtcgaaggatgaaggcggc
cgtcacaccccgttcttcaacaactaccgtccgcagttctacttccgtaccaccgacgtg
accggtgcgatcgaactgccgaaggacaaggaaatggtcatgccgggcgacaacgtgtcg
atcaccgtgcaactgatcaacccgatcgctatggaagaaggtctgcgcttcgctatccgt
gaaggcggtcgtaccgtcggcgccggcgtggttgccaagatcttcgactaa
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