KEGG   Herbaspirillum rubrisubalbicans: Hrubri_0111
Entry
Hrubri_0111       CDS       T04238                                 
Symbol
tufB
Name
(GenBank) GTPase translation elongation factor TU (EF-Tu) protein
  KO
K02358  elongation factor Tu
Organism
hrb  Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:hrb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:hrb03012]
    Hrubri_0111 (tufB)
   03029 Mitochondrial biogenesis [BR:hrb03029]
    Hrubri_0111 (tufB)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hrb04147]
    Hrubri_0111 (tufB)
Translation factors [BR:hrb03012]
 Eukaryotic type
  Elongation factors
   Hrubri_0111 (tufB)
 Prokaryotic type
   Hrubri_0111 (tufB)
Mitochondrial biogenesis [BR:hrb03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    Hrubri_0111 (tufB)
Exosome [BR:hrb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Hrubri_0111 (tufB)
  Exosomal proteins of breast cancer cells
   Hrubri_0111 (tufB)
  Exosomal proteins of colorectal cancer cells
   Hrubri_0111 (tufB)
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 RsgA_GTPase
Other DBs
NCBI-ProteinID: ALU87341
UniProt: A0A0U3KW54
LinkDB
Position
127822..129012
AA seq 396 aa
MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEAKAYDQIDAAPEEKARG
ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI
LLSRQVGVPYIIVFLNKADMVDDEELLELVEMEVRELLSKYEFPGDDLPIVKGSAKLALE
GDTGPLGEQAIMALAEALDTYIPTPERAVDGTFLMPVEDVFSISGRGTVVTGRVERGIIK
VGEEIEIVGIADTQKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVQRGQVLAKPGS
IKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGAIELPKDKEMVMPGDNVS
ITVQLINPIAMEEGLRFAIREGGRTVGAGVVAKIFD
NT seq 1191 nt   +upstreamnt  +downstreamnt
gtggcaaaaggcaagtttgaacggaccaagccgcacgtgaacgtcggcaccatcggtcac
gttgaccacggcaagaccaccctgaccgctgcaatcgcaaccgttctgtcgaagaagttc
ggcggcgaagcgaaggcctacgaccagatcgacgcagcgcctgaagaaaaggcccgcggc
atcaccatcaacaccgcgcacgtcgaatacgaaaccgcgaaccgtcactacgcgcacgtt
gactgcccaggccacgccgactatgtgaagaacatgatcaccggcgcagcccagatggac
ggcgcgatcctggtgtgctcggccgctgacggcccgatgccccagacccgcgaacacatc
ctgctgtcgcgccaagttggcgttccttacatcatcgtcttcctgaacaaggctgacatg
gtggatgacgaagagctgctggaactggtggaaatggaagtccgtgaactgctgtcgaag
tacgagttccctggcgacgacctgcccatcgtgaagggttcggccaagctggcgctggaa
ggcgacaccggtcccctgggcgagcaagccatcatggccctggcagaagccctggacacc
tacatcccgaccccggaacgtgccgttgacggtaccttcctgatgccggtggaagacgtg
ttctcgatctccggccgtggcaccgtggtgaccggtcgcgttgagcgcggcatcatcaag
gtcggcgaagaaatcgaaatcgtcggtatcgctgacactcagaagaccacctgcaccggc
gtggaaatgttccgcaagctgctggaccaaggtcaagctggcgacaacgttggcgtgctg
ctgcgtggcaccaagcgtgaagacgtgcagcgtggccaagttctggccaagccgggttcg
atcaagccgcacaagcacttcaccggcgagatctatgttctgtcgaaggatgaaggcggc
cgtcacaccccgttcttcaacaactaccgtccgcagttctacttccgtaccaccgacgtg
accggtgcgatcgaactgccgaaggacaaggaaatggtcatgccgggcgacaacgtgtcg
atcaccgtgcaactgatcaacccgatcgctatggaagaaggtctgcgcttcgctatccgt
gaaggcggtcgtaccgtcggcgccggcgtggttgccaagatcttcgactaa

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