Herbaspirillum rubrisubalbicans: Hrubri_0691
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Entry
Hrubri_0691 CDS
T04238
Symbol
miaB
Name
(GenBank) tRNA modifying 2-methylthioadenine synthetase protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hrb03016
]
Hrubri_0691 (miaB)
Enzymes [BR:
hrb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Hrubri_0691 (miaB)
Transfer RNA biogenesis [BR:
hrb03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Hrubri_0691 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ALU87911
UniProt:
A0A0U3AN46
LinkDB
All DBs
Position
complement(779372..780712)
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AA seq
446 aa
AA seq
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MQKKVFIKTFGCQMNEYDSDKMADVLNVAEGLIKTDRPEEADVILLNTCSIREKAQEKVF
SDLGRLRALKKDKPDLLIGVGGCVASQEGEAIIKRAPFVDMVFGPQTLHRLPQMISERRY
SGRPQVDISFPEIEKFDHLPPARVEGATAYVSIMEGCSKYCSYCVVPYTRGEEVSRRFED
VLTEVAGLADQGVKEIMLLGQNVNAYRGTMEDGEIADFALLIEYIAELPGIERIRFVTSH
PKEFSQRLIDTYAKVPKLCNHLYLPAQHGSDRTLAAMKRGYTALEYKSVIRRMRKVRPDI
TVQSDFIVGFPGETEEDFEALMKLVADVGFDNSFSFIFSPRPGTPAANLQDDTPAEVKLA
RLQRLQAALNDNAAKISAAQVGTVQRVLVEGVSKRREHELQGRTESNRVVNFDGGPNGQR
LIGQIIEVSITEAFPFSLRGQIVTQH
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaaagtattcatcaaaaccttcggctgccagatgaacgagtacgactcggac
aagatggccgacgtgctcaatgtggccgagggcctcatcaagaccgatcgtccagaagag
gccgacgtgatcctgctgaacacctgctccattcgcgaaaaggcgcaggagaaggtgttt
tccgatctgggccgactgcgcgcgttgaagaaggacaagccggacctgctcatcggcgta
ggtggttgcgtggcgtcgcaggaaggcgaggccatcatcaagcgcgcgcccttcgtggac
atggtgttcggcccgcagaccttgcatcgcctgccgcagatgatttccgaacgccgctac
agcggccgtccacaggtggacatcagctttcccgagatcgagaaattcgaccatctgcca
ccggcgcgggtagaaggtgccacggcgtatgtgtccatcatggaaggttgcagcaagtat
tgcagctactgcgtggtgccctatacgcgcggcgaggaagtctcgcgccgcttcgaggat
gtgctcaccgaagtggccggactggccgaccagggcgtcaaggaaatcatgctgctgggc
cagaacgtgaacgcctatcgcggcacgatggaagatggcgaaatcgctgactttgcgctc
ttgatcgaatacatcgccgagttaccgggcatcgaacgcatccgtttcgtgaccagccat
cccaaggaattctcgcagcgcctcatcgatacctatgccaaggtgcccaagctgtgcaac
cacctctacctgccggcgcagcatggttcggatcgcaccctggccgccatgaagcgcggc
tataccgcgctggaatacaaatcggtgattcggcggatgcgcaaggtccgccccgacatc
acggtgcagtcggacttcatcgtcggcttccccggcgagaccgaggaagatttcgaggcg
ctcatgaagctggtggccgatgtaggcttcgacaacagtttttccttcatcttcagccca
cgccctggcacgccggcggccaacctgcaggacgatacgccggctgaagtcaagctagcc
cgcctgcaacgcctgcaggccgcgctcaacgacaacgccgcgaaaatcagcgcagcccag
gtcggcacggtgcagcgcgtactggtggaaggcgtctccaagcggcgcgagcatgagcta
cagggccgcacggagagcaaccgcgtggtcaacttcgatggcggcccgaacggccagcgc
ctgatcggccagatcatcgaggtcagcatcaccgaagccttccccttctcgctgcgcggc
cagatcgtgacccagcattga
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