KEGG   Herbaspirillum rubrisubalbicans: Hrubri_2996Help
Entry
Hrubri_2996       CDS       T04238                                 

Gene name
sdhB
Definition
(GenBank) succinate dehydrogenase Fe-S subunit protein
  KO
K00240  succinate dehydrogenase / fumarate reductase, iron-sulfur subunit [EC:1.3.5.1 1.3.5.4]
Organism
hrb  Herbaspirillum rubrisubalbicans
Pathway
hrb00020  Citrate cycle (TCA cycle)
hrb00190  Oxidative phosphorylation
hrb00650  Butanoate metabolism
hrb01100  Metabolic pathways
hrb01110  Biosynthesis of secondary metabolites
hrb01120  Microbial metabolism in diverse environments
hrb01130  Biosynthesis of antibiotics
hrb01200  Carbon metabolism
Module
hrb_M00009  Citrate cycle (TCA cycle, Krebs cycle)
hrb_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hrb_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:hrb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    Hrubri_2996 (sdhB)
   00650 Butanoate metabolism
    Hrubri_2996 (sdhB)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    Hrubri_2996 (sdhB)
Enzymes [BR:hrb01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     Hrubri_2996 (sdhB)
    1.3.5.4  fumarate reductase (quinol)
     Hrubri_2996 (sdhB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Fer2_3 Fer4_17 Fer4_8 Fer4_10 Fer4_18 Fer4_9 Fer4_7 Mei4
Motif
Other DBs
NCBI-ProteinID: ALU90165
UniProt: A0A0U3BJY6
LinkDB All DBs
Position
complement(3487482..3488192)
Genome map
AA seq 236 aa AA seqDB search
MTRTLKFKIYRYDPDKDDKPYMQDLTVELKPTDKMLLDALQRIKSDVDDSLALRRSCREG
VCGSDAMNINGKNGLACITNLNELTEPIVLKPLPGLPVIRDLIVDMTNFFKQYDSIKPYL
INDSIPPEKERLQSPEQREELDGVYECILCACCSTSCPSFWWNPDRFVGPAGLLQAYRFI
ADSRDEATGARLDNLEDPYRLFRCRSIMNCVDVCPKGLNPNKAIGKIKELMVRRSV
NT seq 711 nt NT seq  +upstreamnt  +downstreamnt
atgactcgcaccctgaaattcaagatttatcgttacgatccggacaaggacgacaagccg
tacatgcaagacctgacggtggagttgaagcccaccgacaagatgctgctggacgccctg
caacgcatcaagtccgatgtggacgattcgctggcgctgcgtcgctcctgccgcgaaggc
gtgtgcggctcggacgccatgaacatcaacggcaagaacggtctggcctgcatcaccaat
ctgaacgagctgaccgaacccatcgttctgaagccgctgcctggcctgccggtgatccgc
gacctgatcgtggacatgaccaacttcttcaagcaatacgactcgatcaagccctacctg
atcaacgacagcattccgcccgaaaaggaacgcctgcagtcgcccgaacagcgtgaagag
cttgatggcgtctacgagtgcatcctgtgcgcctgctgctcgacctcctgcccgtcgttc
tggtggaacccggaccgtttcgtcggcccagctggcctgctgcaagcctaccgcttcatc
gccgacagccgcgacgaagccaccggcgcgcgtctggacaatctggaagacccgtaccgc
ctgttccgttgccgttccatcatgaactgcgtcgatgtctgccccaagggtctgaacccc
aacaaggccatcggcaagatcaaggaactgatggttcgtcgttcggtataa

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