Herbaspirillum rubrisubalbicans: Hrubri_3935
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Entry
Hrubri_3935 CDS
T04238
Symbol
pcaB
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00362
Benzoate degradation
hrb01100
Metabolic pathways
hrb01120
Microbial metabolism in diverse environments
hrb01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Hrubri_3935 (pcaB)
Enzymes [BR:
hrb01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
Hrubri_3935 (pcaB)
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GFIT
Motif
Pfam:
Lyase_1
ADSL_C
Motif
Other DBs
NCBI-ProteinID:
ALU91085
UniProt:
A0A0U3JWF9
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All DBs
Position
4634958..4636325
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AA seq
455 aa
AA seq
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MSVSIFDSFLTTSEMIAVFDDQAVVQAMLRFEQVLAEAEAAEGIIPEAAARAIASVCRAP
LYDINALIVAGRRAGALAIPLVKELQRTVALYSEQAATHVHWGSTSQDVLDTAMVLVTRD
ALRLVDDELAQLSGRLLELAQSHLATPVLARTLMQPAQVTSLGLKFCNWAAPLLRARAQL
QALAERALQLQLGGAVGTLSVLGEKGPAVAARMAAALELQAPQAAWHTQRDEWIRVGTEM
AVLAGSLGKIATDLSLMAQGEIAELAEPSGNGRGGSSAMPHKRNPVSSMIALAAAARAPQ
QAATLLAAMSQQHERGLGNWQAELAEWPALFLGVHGALRALNDAFAGLVIDAARMLRNID
ALQGLVFAESASIALAGVIGRPRAHALLEQLTRKTVAEGTQLVDMLVQAVQADAQLGREL
DLDMLRALFDPVEATLPARRIAERQLDTWRSVLAQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtttcgatcttcgacagcttcctcaccacctccgagatgatcgcggtcttcgac
gaccaggcggtggtgcaggcaatgctgcgcttcgaacaggtcctggccgaagccgaagcg
gccgaaggcatcatccccgaagctgcggcacgcgctattgccagcgtctgccgcgccccg
ctctacgacatcaatgcgctgatcgtggccgggcgccgcgccggcgccctggccatcccg
ctggtcaaggaattgcagcgcaccgtggccctctacagcgaacaggccgccacccacgtg
cactggggcagcaccagccaggatgtgctggacacggccatggtgctggttacgcgcgac
gccttgcgactggtggatgatgaactggcgcaactgtcgggccgactgctggaactggcg
caatcccatctcgccaccccggtactggcgcgcaccctgatgcagccggcgcaggtcacc
agcctgggcctgaagttctgtaactgggccgcgccgctgctgcgcgcacgggcgcaattg
caggcgctggccgaacgcgccctgcaattgcagctcgggggcgcggtgggcaccctgtcc
gtgctgggcgagaaaggcccggccgtggccgcgcgcatggccgccgcactggaattgcag
gccccgcaagcggcctggcacacccagcgcgatgaatggatacgcgtgggaacagaaatg
gcagtgttggccggcagcctgggcaagatcgccaccgacctgtcgctgatggcgcaaggc
gagatcgctgaactggccgagccttccggcaatggccgtggcggttcctcggccatgccg
cacaagcgcaacccggtctcttccatgatcgccctggctgccgccgcgcgcgccccgcaa
caggcagccaccctgctggcggcgatgtcgcagcagcacgaacgcggcctgggcaactgg
caagccgaactggccgaatggccggccctattcctgggcgtgcatggcgcgctgcgggcg
ctcaacgatgcctttgccgggctggtcatcgatgcggcgcgcatgttgcgcaacatcgat
gccctgcagggattggtgtttgccgaatccgcctccattgccctggccggcgtgatcggc
cgcccgcgcgcccatgccctgctggaacaactgacccgcaagaccgtggccgaaggcacg
caactggttgatatgctggtgcaagcagtgcaggccgatgcgcagctcggccgcgaactt
gacctcgacatgctgcgcgccttgttcgatccggtcgaggcaaccctgccggcgcggcgc
attgccgaacgccagctcgacacctggcgttcggtgctggcacagtag
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