KEGG   Herbaspirillum rubrisubalbicans: Hrubri_4609Help
Entry
Hrubri_4609       CDS       T04238                                 

Gene name
gatB
Definition
(GenBank) Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
hrb  Herbaspirillum rubrisubalbicans
Pathway
hrb00970  Aminoacyl-tRNA biosynthesis
hrb01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:hrb00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Hrubri_4609 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:hrb03029]
    Hrubri_4609 (gatB)
Enzymes [BR:hrb01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     Hrubri_4609 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     Hrubri_4609 (gatB)
Mitochondrial biogenesis [BR:hrb03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    Hrubri_4609 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey
Motif
Other DBs
NCBI-ProteinID: ALU91754
UniProt: A0A0U3LT90
LinkDB All DBs
Position
complement(5421874..5423334)
Genome map
AA seq 486 aa AA seqDB search
MQWEVVIGLETHTQLSTQSKIFSGSSTRFGAEPNTQASPVDLALPGVLPVLNKGAVERAI
QFGLAIGATIAPRSIFARKNYFYPDLPKGYQISQFEIPVVQGGTMSFAVEKEGKTEIKTI
NLTRAHLEEDAGKSLHEDYQGMTGIDLNRAGTPLLEIVTEPEMRSAAEAVGYAKALHSLV
MWLGICDGNMQEGSFRCDANVSVRPVGQEKFGTRCEIKNLNSFRFLEEAINYEVRRQIEL
IEDGGTVVQETRLYDPDKKETRSMRSKEDAQDYRYFPDPDLPPLAISQEWIERVKATMPE
LPAAMRERFVADYALPEYDAMVLTQSKGMASYFEAVVAAAGKEQAKPAANWLMGDVASTL
NREDTDIADAPVKAAQLALLLKRIADGTISNKIAKEVFASMWEAKSDKDSLADDIIEAKG
LKQISDSGALEAIVDQVLAANEKSVAEFRAGKEQAINALIGQAMKATRGKANPAQLTELL
RKKLAG
NT seq 1461 nt NT seq  +upstreamnt  +downstreamnt
atgcagtgggaagtcgtcatcggcctcgaaacgcacacgcagctttcgacccaatccaag
attttcagcggcagctcgacccgcttcggcgccgaacccaacacccaggccagcccggtg
gacctggccttgccgggcgtgttgccggtcttgaacaagggcgcagtggaacgtgcgatc
cagtttggtctggccatcggcgccaccatcgcgccgcgctccatcttcgcgcgcaagaat
tacttctatcctgacctgcccaagggctaccagatcagccagttcgagatccccgtggtg
caaggcggcaccatgtccttcgcggtagagaaggaaggcaagaccgagatcaagaccatc
aacctgacccgcgcccacctcgaagaagacgccggcaagtccctgcacgaggattaccag
ggcatgaccggcatcgacctcaaccgtgccggcacgccgctcttggaaatcgtcaccgaa
cccgagatgcgcagcgccgccgaagccgtgggctatgccaaggccctgcattcgctggtg
atgtggctgggcatctgcgatggcaacatgcaggaaggctccttccgctgcgacgccaac
gtctccgtgcgtccggtcggccaggaaaaattcggcacccgctgcgagattaagaacctg
aactccttccgcttcctggaagaagccatcaactacgaagtgcggcgccagatcgagctg
attgaagacggcggcaccgtggtgcaggaaacccgcctctacgacccggacaagaaggaa
acccgctccatgcgcagcaaggaagacgcgcaggattaccgttacttccccgaccccgac
ctgccgccgctggccatctcgcaggaatggatcgaacgcgtcaaggccaccatgcccgag
ctgcctgccgccatgcgcgaacgtttcgtggccgactatgcgctgccggaatacgatgcc
atggtgctgacccaatccaagggcatggcctcctacttcgaagccgtggtggctgcagcc
ggcaaggaacaagccaagccggccgccaactggttgatgggtgacgtcgcctccacgctc
aatcgcgaagacaccgacatcgccgatgcccccgtgaaggctgcacaattggcgctgctg
ttgaagcgcatcgccgatggcaccatctccaacaagatcgccaaggaagtctttgcgagc
atgtgggaagccaagtccgacaaggactcgctggccgacgacatcatcgaagccaagggc
ctgaagcagatctccgatagtggcgcgctggaagccatcgtggaccaagtgctggcggcc
aatgaaaaatcggtggcggaattccgcgccggcaaggaacaggccatcaacgccctgatc
ggccaggccatgaaggccacgcgcggcaaggccaatccggcgcaattgactgaactgctg
cgcaagaagctggcgggctga

DBGET integrated database retrieval system