KEGG   Homo sapiens (human): 10332Help
Entry
10332             CDS       T01001                                 

Gene name
CLEC4M, CD209L, CD299, DC-SIGN2, DC-SIGNR, DCSIGNR, HP10347, L-SIGN, LSIGN
Definition
(RefSeq) C-type lectin domain family 4 member M
  KO
K06563  C-type lectin domain family 4 member M
Organism
hsa  Homo sapiens (human)
Pathway
hsa04145  Phagosome
hsa04625  C-type lectin receptor signaling pathway
hsa05152  Tuberculosis
hsa05162  Measles
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    10332 (CLEC4M)
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    10332 (CLEC4M)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    10332 (CLEC4M)
  09172 Infectious disease: viral
   05162 Measles
    10332 (CLEC4M)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    10332 (CLEC4M)
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:hsa04054]
    10332 (CLEC4M)
   04090 CD molecules [BR:hsa04090]
    10332 (CLEC4M)
   04091 Lectins [BR:hsa04091]
    10332 (CLEC4M)
Membrane trafficking [BR:hsa04131]
 Endocytosis
  Phagocytosis
   C-lectin receptors
    10332 (CLEC4M)
Pattern recognition receptors [BR:hsa04054]
 Membrane-bound pattern recognition receptors
  C-type lectin receptors
   10332 (CLEC4M)
CD molecules [BR:hsa04090]
 Proteins
  10332 (CLEC4M)
Lectins [BR:hsa04091]
 C-Type lectins
  Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
   DC-SIGN subgroup
    10332 (CLEC4M)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Lectin_C DUF2170 DUF2730 NOG1_N Occludin_ELL Vps5 NPV_P10 baeRF_family3 RP-C_C Tup_N tRNA-synt_His DUF2357 UL45 DUF4363 DGCR6 DUF4795
Motif
Other DBs
NCBI-GeneID: 10332
NCBI-ProteinID: NP_055072
OMIM: 605872
HGNC: 13523
Ensembl: ENSG00000104938
Vega: OTTHUMG00000182432
Pharos: Q9H2X3(Tbio)
UniProt: Q9H2X3
LinkDB All DBs
Structure
PDB: 

Position
19p13.2
AA seq 399 aa AA seqDB search
MSDSKEPRVQQLGLLEEDPTTSGIRLFPRDFQFQQIHGHKSSTGCLGHGALVLQLLSFML
LAGVLVAILVQVSKVPSSLSQEQSEQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLK
AAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQE
IYQELTRLKAAVGELPEKSKLQEIYQELTELKAAVGELPEKSKLQEIYQELTQLKAAVGE
LPDQSKQQQIYQELTDLKTAFERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVR
AQLVVIKTAEEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEP
NNSGNEDCAEFSGSGWNDNRCDVDNYWICKKPAACFRDE
NT seq 1200 nt NT seq  +upstreamnt  +downstreamnt
atgagtgactccaaggaaccaagggtgcagcagctgggcctcctggaagaagatccaaca
accagtggcatcagactttttccaagagactttcaattccagcagatacatggccacaag
agctctacagggtgtcttggccatggcgccctggtgctgcaactcctctccttcatgctc
ttggctggggtcctggtggccatccttgtccaagtgtccaaggtccccagctccctaagt
caggaacaatccgagcaagacgcaatctaccagaacctgacccagcttaaagctgcagtg
ggtgagctctcagagaaatccaagctgcaggagatctaccaggagctgacccagctgaag
gctgcagtgggtgagttgccagagaaatccaagctgcaggagatctaccaggagctgacc
cggctgaaggctgcagtgggtgagttgccagagaaatccaagctgcaggagatctaccag
gagctgacccggctgaaggctgcagtgggtgagttgccagagaaatccaagctgcaggag
atctaccaggagctgacccggctgaaggctgcagtgggtgagttgccagagaaatccaag
ctgcaggagatctaccaggagctgacggagctgaaggctgcagtgggtgagttgccagag
aaatccaagctgcaggagatctaccaggagctgacccagctgaaggctgcagtgggtgag
ttgccagaccagtccaagcagcagcaaatctatcaagaactgaccgatttgaagactgca
tttgaacgcctgtgccgccactgtcccaaggactggacattcttccaaggaaactgttac
ttcatgtctaactcccagcggaactggcacgactccgtcaccgcctgccaggaagtgagg
gcccagctcgtcgtaatcaaaactgctgaggagcagaacttcctacagctgcagacttcc
aggagtaaccgcttctcctggatgggactttcagacctaaatcaggaaggcacgtggcaa
tgggtggacggctcacctctgtcacccagcttccagcggtactggaacagtggagaaccc
aacaatagcgggaatgaagactgtgcggaatttagtggcagtggctggaacgacaatcga
tgtgacgttgacaattactggatctgcaaaaagcccgcagcctgcttcagagacgaatag

KEGG   Homo sapiens (human): 30835Help
Entry
30835             CDS       T01001                                 

Gene name
CD209, CDSIGN, CLEC4L, DC-SIGN, DC-SIGN1
Definition
(RefSeq) CD209 molecule
  KO
K06563  C-type lectin domain family 4 member M
Organism
hsa  Homo sapiens (human)
Pathway
hsa04145  Phagosome
hsa04625  C-type lectin receptor signaling pathway
hsa05152  Tuberculosis
hsa05162  Measles
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    30835 (CD209)
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    30835 (CD209)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    30835 (CD209)
  09172 Infectious disease: viral
   05162 Measles
    30835 (CD209)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    30835 (CD209)
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:hsa04054]
    30835 (CD209)
   04090 CD molecules [BR:hsa04090]
    30835 (CD209)
   04091 Lectins [BR:hsa04091]
    30835 (CD209)
Membrane trafficking [BR:hsa04131]
 Endocytosis
  Phagocytosis
   C-lectin receptors
    30835 (CD209)
Pattern recognition receptors [BR:hsa04054]
 Membrane-bound pattern recognition receptors
  C-type lectin receptors
   30835 (CD209)
CD molecules [BR:hsa04090]
 Proteins
  30835 (CD209)
Lectins [BR:hsa04091]
 C-Type lectins
  Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
   DC-SIGN subgroup
    30835 (CD209)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Lectin_C DUF2170 DUF2730 Occludin_ELL Baculo_PEP_C NOG1_N Vps5 baeRF_family3 DGCR6 Phage_CP76 FIN1
Motif
Other DBs
NCBI-GeneID: 30835
NCBI-ProteinID: NP_066978
OMIM: 604672
HGNC: 1641
Ensembl: ENSG00000090659
Vega: OTTHUMG00000182530
Pharos: Q9NNX6(Tbio)
UniProt: Q9NNX6 B2R907
LinkDB All DBs
Structure
PDB: 

Position
19p13.2
AA seq 404 aa AA seqDB search
MSDSKEPRLQQLGLLEEEQLRGLGFRQTRGYKSLAGCLGHGPLVLQLLSFTLLAGLLVQV
SKVPSSISQEQSRQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLKAAVGELPEKSKL
QEIYQELTRLKAAVGELPEKSKLQEIYQELTWLKAAVGELPEKSKMQEIYQELTRLKAAV
GELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQ
ELTQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQ
NFLQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFS
GNGWNDDKCNLAKFWICKKSAASCSRDEEQFLSPAPATPNPPPA
NT seq 1215 nt NT seq  +upstreamnt  +downstreamnt
atgagtgactccaaggaaccaagactgcagcagctgggcctcctggaggaggaacagctg
agaggccttggattccgacagactcgaggatacaagagcttagcagggtgtcttggccat
ggtcccctggtgctgcaactcctctccttcacgctcttggctgggctccttgtccaagtg
tccaaggtccccagctccataagtcaggaacaatccaggcaagacgcgatctaccagaac
ctgacccagcttaaagctgcagtgggtgagctctcagagaaatccaagctgcaggagatc
taccaggagctgacccagctgaaggctgcagtgggtgagcttccagagaaatctaagctg
caggagatctaccaggagctgacccggctgaaggctgcagtgggtgagcttccagagaaa
tctaagctgcaggagatctaccaggagctgacctggctgaaggctgcagtgggtgagctt
ccagagaaatctaagatgcaggagatctaccaggagctgactcggctgaaggctgcagtg
ggtgagcttccagagaaatctaagcagcaggagatctaccaggagctgacccggctgaag
gctgcagtgggtgagcttccagagaaatctaagcagcaggagatctaccaggagctgacc
cggctgaaggctgcagtgggtgagcttccagagaaatctaagcagcaggagatctaccag
gagctgacccagctgaaggctgcagtggaacgcctgtgccacccctgtccctgggaatgg
acattcttccaaggaaactgttacttcatgtctaactcccagcggaactggcacgactcc
atcaccgcctgcaaagaagtgggggcccagctcgtcgtaatcaaaagtgctgaggagcag
aacttcctacagctgcagtcttccagaagtaaccgcttcacctggatgggactttcagat
ctaaatcaggaaggcacgtggcaatgggtggacggctcacctctgttgcccagcttcaag
cagtattggaacagaggagagcccaacaacgttggggaggaagactgcgcggaatttagt
ggcaatggctggaacgacgacaaatgtaatcttgccaaattctggatctgcaaaaagtcc
gcagcctcctgctccagggatgaagaacagtttctttctccagcccctgccaccccaaac
ccccctcctgcgtag

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