KEGG   Homo sapiens (human): 10371Help
Entry
10371             CDS       T01001                                 

Gene name
SEMA3A, COLL1, HH16, Hsema-I, Hsema-III, SEMA1, SEMAD, SEMAIII, SEMAL, SemD, coll-1
Definition
(RefSeq) semaphorin 3A
  KO
K06840  semaphorin 3
Organism
hsa  Homo sapiens (human)
Pathway
hsa04360  Axon guidance
Disease
H00255  Hypogonadotropic hypogonadism
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    10371 (SEMA3A)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Sema ig V-set Ig_3 PSI Ig_2 I-set Ig_6
Motif
Other DBs
NCBI-GeneID: 10371
NCBI-ProteinID: NP_006071
OMIM: 603961
HGNC: 10723
Ensembl: ENSG00000075213
Vega: OTTHUMG00000023443
Pharos: Q14563(Tbio)
UniProt: Q14563
LinkDB All DBs
Position
7q21.11
AA seq 771 aa AA seqDB search
MGWLTRIVCLFWGVLLTARANYQNGKNNVPRLKLSYKEMLESNNVITFNGLANSSSYHTF
LLDEERSRLYVGAKDHIFSFDLVNIKDFQKIVWPVSYTRRDECKWAGKDILKECANFIKV
LKAYNQTHLYACGTGAFHPICTYIEIGHHPEDNIFKLENSHFENGRGKSPYDPKLLTASL
LIDGELYSGTAADFMGRDFAIFRTLGHHHPIRTEQHDSRWLNDPKFISAHLISESDNPED
DKVYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNG
IDTHFDELQDVFLMNFKDPKNPVVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRD
GPNYQWVPYQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPMNNRP
IVIKTDVNYQFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSIPKETWYDLEEVLLEEM
TVFREPTAISAMELSTKQQQLYIGSTAGVAQLPLHRCDIYGKACAECCLARDPYCAWDGS
ACSRYFPTAKRRTRRQDIRNGDPLTHCSDLHHDNHHGHSPEERIIYGVENSSTFLECSPK
SQRALVYWQFQRRNEERKEEIRVDDHIIRTDQGLLLRSLQQKDSGNYLCHAVEHGFIQTL
LKVTLEVIDTEHLEELLHKDDDGDGSKTKEMSNSMTPSQKVWYRDFMQLINHPNLNTMDE
FCEQVWKRDRKQRRQRPGHTPGNSNKWKHLQENKKGRNRRTHEFERAPRSV
NT seq 2316 nt NT seq  +upstreamnt  +downstreamnt
atgggctggttaactaggattgtctgtcttttctggggagtattacttacagcaagagca
aactatcagaatgggaagaacaatgtgccaaggctgaaattatcctacaaagaaatgttg
gaatccaacaatgtgatcactttcaatggcttggccaacagctccagttatcataccttc
cttttggatgaggaacggagtaggctgtatgttggagcaaaggatcacatattttcattc
gacctggttaatatcaaggattttcaaaagattgtgtggccagtatcttacaccagaaga
gatgaatgcaagtgggctggaaaagacatcctgaaagaatgtgctaatttcatcaaggta
cttaaggcatataatcagactcacttgtacgcctgtggaacgggggcttttcatccaatt
tgcacctacattgaaattggacatcatcctgaggacaatatttttaagctggagaactca
cattttgaaaacggccgtgggaagagtccatatgaccctaagctgctgacagcatccctt
ttaatagatggagaattatactctggaactgcagctgattttatggggcgagactttgct
atcttccgaactcttgggcaccaccacccaatcaggacagagcagcatgattccaggtgg
ctcaatgatccaaagttcattagtgcccacctcatctcagagagtgacaatcctgaagat
gacaaagtatactttttcttccgtgaaaatgcaatagatggagaacactctggaaaagct
actcacgctagaataggtcagatatgcaagaatgactttggagggcacagaagtctggtg
aataaatggacaacattcctcaaagctcgtctgatttgctcagtgccaggtccaaatggc
attgacactcattttgatgaactgcaggatgtattcctaatgaactttaaagatcctaaa
aatccagttgtatatggagtgtttacgacttccagtaacattttcaagggatcagccgtg
tgtatgtatagcatgagtgatgtgagaagggtgttccttggtccatatgcccacagggat
ggacccaactatcaatgggtgccttatcaaggaagagtcccctatccacggccaggaact
tgtcccagcaaaacatttggtggttttgactctacaaaggaccttcctgatgatgttata
acctttgcaagaagtcatccagccatgtacaatccagtgtttcctatgaacaatcgccca
atagtgatcaaaacggatgtaaattatcaatttacacaaattgtcgtagaccgagtggat
gcagaagatggacagtatgatgttatgtttatcggaacagatgttgggaccgttcttaaa
gtagtttcaattcctaaggagacttggtatgatttagaagaggttctgctggaagaaatg
acagtttttcgggaaccgactgctatttcagcaatggagctttccactaagcagcaacaa
ctatatattggttcaacggctggggttgcccagctccctttacaccggtgtgatatttac
gggaaagcgtgtgctgagtgttgcctcgcccgagacccttactgtgcttgggatggttct
gcatgttctcgctattttcccactgcaaagagacgcacaagacgacaagatataagaaat
ggagacccactgactcactgttcagacttacaccatgataatcaccatggccacagccct
gaagagagaatcatctatggtgtagagaatagtagcacatttttggaatgcagtccgaag
tcgcagagagcgctggtctattggcaattccagaggcgaaatgaagagcgaaaagaagag
atcagagtggatgatcatatcatcaggacagatcaaggccttctgctacgtagtctacaa
cagaaggattcaggcaattacctctgccatgcggtggaacatgggttcatacaaactctt
cttaaggtaaccctggaagtcattgacacagagcatttggaagaacttcttcataaagat
gatgatggagatggctctaagaccaaagaaatgtccaatagcatgacacctagccagaag
gtctggtacagagacttcatgcagctcatcaaccaccccaatctcaacacaatggatgag
ttctgtgaacaagtttggaaaagggaccgaaaacaacgtcggcaaaggccaggacatacc
ccagggaacagtaacaaatggaagcacttacaagaaaataagaaaggtagaaacaggagg
acccacgaatttgagagggcacccaggagtgtctga

KEGG   Homo sapiens (human): 10512Help
Entry
10512             CDS       T01001                                 

Gene name
SEMA3C, SEMAE, SemE
Definition
(RefSeq) semaphorin 3C
  KO
K06840  semaphorin 3
Organism
hsa  Homo sapiens (human)
Pathway
hsa04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    10512 (SEMA3C)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Sema I-set Ig_3 PSI V-set Ig_2 ig
Motif
Other DBs
NCBI-GeneID: 10512
NCBI-ProteinID: NP_006370
OMIM: 602645
HGNC: 10725
Ensembl: ENSG00000075223
Vega: OTTHUMG00000023447
Pharos: Q99985(Tbio)
UniProt: Q99985
LinkDB All DBs
Position
7q21.11
AA seq 751 aa AA seqDB search
MAFRTICVLVGVFICSICVKGSSQPQARVYLTFDELRETKTSEYFSLSHHPLDYRILLMD
EDQDRIYVGSKDHILSLNINNISQEALSVFWPASTIKVEECKMAGKDPTHGCGNFVRVIQ
TFNRTHLYVCGSGAFSPVCTYLNRGRRSEDQVFMIDSKCESGKGRCSFNPNVNTVSVMIN
EELFSGMYIDFMGTDAAIFRSLTKRNAVRTDQHNSKWLSEPMFVDAHVIPDGTDPNDAKV
YFFFKEKLTDNNRSTKQIHSMIARICPNDTGGLRSLVNKWTTFLKARLVCSVTDEDGPET
HFDELEDVFLLETDNPRTTLVYGIFTTSSSVFKGSAVCVYHLSDIQTVFNGPFAHKEGPN
HQLISYQGRIPYPRPGTCPGGAFTPNMRTTKEFPDDVVTFIRNHPLMYNSIYPIHKRPLI
VRIGTDYKYTKIAVDRVNAADGRYHVLFLGTDRGTVQKVVVLPTNNSVSGELILEELEVF
KNHAPITTMKISSKKQQLYVSSNEGVSQVSLHRCHIYGTACADCCLARDPYCAWDGHSCS
RFYPTGKRRSRRQDVRHGNPLTQCRGFNLKAYRNAAEIVQYGVKNNTTFLECAPKSPQAS
IKWLLQKDKDRRKEVKLNERIIATSQGLLIRSVQGSDQGLYHCIATENSFKQTIAKINFK
VLDSEMVAVVTDKWSPWTWASSVRALPFHPKDIMGAFSHSEMQMINQYCKDTRQQHQQGD
ESQKMRGDYGKLKALINSRKSRNRRNQLPES
NT seq 2256 nt NT seq  +upstreamnt  +downstreamnt
atggcattccggacaatttgcgtgttggttggagtatttatttgttctatctgtgtgaaa
ggatcttcccagccccaagcaagagtttatttaacatttgatgaacttcgagaaaccaag
acctctgaatacttcagcctttcccaccatcctttagactacaggattttattaatggat
gaagatcaggaccggatatatgtgggaagcaaagatcacattctttccctgaatattaac
aatataagtcaagaagctttgagtgttttctggccagcatctacaatcaaagttgaagaa
tgcaaaatggctggcaaagatcccacacacggctgtgggaactttgtccgtgtaattcag
actttcaatcgcacacatttgtatgtctgtgggagtggcgctttcagtcctgtctgtact
tacttgaacagagggaggagatcagaggaccaagttttcatgattgactccaagtgtgaa
tctggaaaaggacgctgctctttcaaccccaacgtgaacacggtgtctgttatgatcaat
gaggagcttttctctggaatgtatatagatttcatggggacagatgctgctatttttcga
agtttaaccaagaggaatgcggtcagaactgatcaacataattccaaatggctaagtgaa
cctatgtttgtagatgcacatgtcatcccagatggtactgatccaaatgatgctaaggtg
tacttcttcttcaaagaaaaactgactgacaataacaggagcacgaaacagattcattcc
atgattgctcgaatatgtcctaatgacactggtggactgcgtagccttgtcaacaagtgg
accactttcttaaaggcgaggctggtgtgctcggtaacagatgaagacggcccagaaaca
cactttgatgaattagaggatgtgtttctgctggaaactgataacccgaggacaacacta
gtgtatggcatttttacaacatcaagctcagttttcaaaggatcagccgtgtgtgtgtat
catttatctgatatacagactgtgtttaatgggccttttgcccacaaagaagggcccaat
catcagctgatttcctatcagggcagaattccatatcctcgccctggaacttgtccagga
ggagcatttacacccaatatgcgaaccaccaaggagttcccagatgatgttgtcactttt
attcggaaccatcctctcatgtacaattccatctacccaatccacaaaaggcctttgatt
gttcgtattggcactgactacaagtatacaaagatagctgtggatcgagtgaacgctgct
gatgggagataccatgtcctgtttctcggaacagatcggggtactgtgcaaaaagtggtt
gttcttcctactaacaactctgtcagtggcgagctcattctggaggagctggaagtcttt
aagaatcatgctcctataacaacaatgaaaatttcatctaaaaagcaacagttgtatgtg
agttccaatgaaggggtttcccaggtatctctgcaccgctgccacatctatggtacagcc
tgtgctgactgctgcctggcgcgggacccttattgcgcctgggatggccattcctgttcc
agattctacccaactgggaaacggaggagccgaagacaagatgtgagacatggaaaccca
ctgactcaatgcagaggatttaatctaaaagcatacagaaatgcagctgaaattgtccag
tatggagtaaaaaataacaccacttttctggagtgtgcccccaagtctccgcaggcatct
atcaagtggctgttacagaaagacaaagacaggaggaaagaggttaagctgaatgaacga
ataatagccacttcacagggactcctgatccgctctgttcagggttctgaccaaggactt
tatcactgcattgctacagaaaatagtttcaagcagaccatagccaagatcaacttcaaa
gttttagattcagaaatggtggctgttgtgacggacaaatggtccccatggacctgggcc
agctctgtgagggctttacccttccacccgaaggacatcatgggggcattcagccactca
gaaatgcagatgattaaccaatattgcaaagacactcggcagcaacatcagcagggagat
gaatcacagaaaatgagaggggactatggcaagttaaaggccctcatcaatagtcggaaa
agtagaaacaggaggaatcagttgccagagtcataa

KEGG   Homo sapiens (human): 223117Help
Entry
223117            CDS       T01001                                 

Gene name
SEMA3D, Sema-Z2, coll-2
Definition
(RefSeq) semaphorin 3D
  KO
K06840  semaphorin 3
Organism
hsa  Homo sapiens (human)
Pathway
hsa04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    223117 (SEMA3D)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Sema Ig_3 Ig_6 V-set PSI I-set ig Ig_2
Motif
Other DBs
NCBI-GeneID: 223117
NCBI-ProteinID: NP_689967
OMIM: 609907
HGNC: 10726
Ensembl: ENSG00000153993
Vega: OTTHUMG00000154569
Pharos: O95025(Tbio)
UniProt: O95025
LinkDB All DBs
Position
7q21.11
AA seq 777 aa AA seqDB search
MNANKDERLKARSQDFHLFPALMMLSMTMLFLPVTGTLKQNIPRLKLTYKDLLLSNSCIP
FLGSSEGLDFQTLLLDEERGRLLLGAKDHIFLLSLVDLNKNFKKIYWPAAKERVELCKLA
GKDANTECANFIRVLQPYNKTHIYVCGTGAFHPICGYIDLGVYKEDIIFKLDTHNLESGR
LKCPFDPQQPFASVMTDEYLYSGTASDFLGKDTAFTRSLGPTHDHHYIRTDISEHYWLNG
AKFIGTFFIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKW
TTFLKARLICSIPGSDGADTYFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVY
SMADIRAVFNGPYAHKESADHRWVQYDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISF
IKRHSVMYKSVYPVAGGPTFKRINVDYRLTQIVVDHVIAEDGQYDVMFLGTDIGTVLKVV
SISKEKWNMEEVVLEELQIFKHSSIILNMELSLKQQQLYIGSRDGLVQLSLHRCDTYGKA
CADCCLARDPYCAWDGNACSRYAPTSKRRARRQDVKYGDPITQCWDIEDSISHETADEKV
IFGIEFNSTFLECIPKSQQATIKWYIQRSGDEHREELKPDERIIKTEYGLLIRSLQKKDS
GMYYCKAQEHTFIHTIVKLTLNVIENEQMENTQRAEHEEGKVKDLLAESRLRYKDYIQIL
SSPNFSLDQYCEQMWHREKRRQRNKGGPKWKHMQEMKKKRNRRHHRDLDELPRAVAT
NT seq 2334 nt NT seq  +upstreamnt  +downstreamnt
atgaatgctaataaagatgaaagacttaaagccagaagccaagattttcacctttttcct
gctttgatgatgctaagcatgaccatgttgtttcttccagtcactggcactttgaagcaa
aatattccaagactcaagctaacctacaaagacttgctgctttcaaatagctgtattccc
tttttgggttcatcagaaggactggattttcaaactcttctcttagatgaggaaagaggc
aggctgctcttgggagccaaagaccacatctttctactcagtctggttgacttaaacaaa
aattttaagaagatttattggcctgctgcaaaggaacgggtggaattatgtaaattagct
gggaaagatgccaatacagaatgtgcaaatttcatcagagtacttcagccctataacaaa
actcacatatatgtgtgtggaactggagcatttcatccaatatgtgggtatattgatctt
ggagtctacaaggaggatattatattcaaactagacacacataatttggagtctggcaga
ctgaaatgtcctttcgatcctcagcagccttttgcttcagtaatgacagatgagtacctc
tactctggaacagcttctgatttccttggcaaagatactgcattcactcgatcccttggg
cctactcatgaccaccactacatcagaactgacatttcagagcactactggctcaatgga
gcaaaatttattggaactttcttcataccagacacctacaatccagatgatgataaaata
tatttcttctttcgtgaatcatctcaagaaggcagtacctccgataaaaccatcctttct
cgagttggaagagtttgtaagaatgatgtaggaggacaacgcagcctgataaacaagtgg
acgacttttcttaaggccagactgatttgctcaattcctggaagtgatggggcagatact
tactttgatgagcttcaagatatttatttactccccacaagagatgaaagaaatcctgta
gtatatggagtctttactacaaccagctccatcttcaaaggctctgctgtttgtgtgtat
agcatggctgacatcagagcagtttttaatggtccatatgctcataaggaaagtgcagac
catcgttgggtgcagtatgatgggagaattccttatccacggcctggtacatgtccaagc
aaaacctatgacccactgattaagtccacccgagattttccagatgatgtcatcagtttc
ataaagcggcactctgtgatgtataagtccgtatacccagttgcaggaggaccaacgttc
aagagaatcaatgtggattacagactgacacagatagtggtggatcatgtcattgcagaa
gatggccagtacgatgtaatgtttcttggaacagacattggaactgtcctcaaagttgtc
agcatttcaaaggaaaagtggaatatggaagaggtagtgctggaggagttgcagatattc
aagcactcatcaatcatcttgaacatggaattgtctctgaagcagcaacaattgtacatt
ggttcccgagatggattggttcagctctccttgcacagatgcgacacttatgggaaagct
tgcgcagactgttgtcttgccagagacccctactgtgcctgggatggaaatgcatgctct
cgatatgctcctacttctaaaaggagagctagacgccaagatgtaaaatatggcgaccca
atcacccagtgctgggacatcgaagacagcattagtcatgaaactgctgatgaaaaggtg
atttttggcattgaatttaactcaacctttctggaatgtatacctaaatcccaacaagca
actattaaatggtatatccagaggtcaggggatgagcatcgagaggagttgaagcccgat
gaaagaatcatcaaaacggaatatgggctactgattcgaagtttgcagaagaaggattct
gggatgtattactgcaaagcccaggagcacactttcatccacaccatagtgaagctgact
ttgaatgtcattgagaatgaacagatggaaaatacccagagggcagagcatgaggagggg
aaggtcaaggatctattggctgagtcacggttgagatacaaagactacatccaaatcctt
agcagcccaaacttcagcctcgaccagtactgcgaacagatgtggcacagggagaagcgg
agacagagaaacaaggggggcccaaagtggaagcacatgcaggaaatgaagaagaaacga
aatcgaagacatcacagagacctggatgagctccctagagctgtagccacgtag

KEGG   Homo sapiens (human): 56920Help
Entry
56920             CDS       T01001                                 

Gene name
SEMA3G, sem2
Definition
(RefSeq) semaphorin 3G
  KO
K06840  semaphorin 3
Organism
hsa  Homo sapiens (human)
Pathway
hsa04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    56920 (SEMA3G)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Sema ig PSI Ig_3
Motif
Other DBs
NCBI-GeneID: 56920
NCBI-ProteinID: NP_064548
HGNC: 30400
Ensembl: ENSG00000010319
Vega: OTTHUMG00000158570
Pharos: Q9NS98(Tbio)
UniProt: Q9NS98
LinkDB All DBs
Position
3p21.1
AA seq 782 aa AA seqDB search
MAPSAWAICWLLGGLLLHGGSSGPSPGPSVPRLRLSYRDLLSANRSAIFLGPQGSLNLQA
MYLDEYRDRLFLGGLDALYSLRLDQAWPDPREVLWPPQPGQREECVRKGRDPLTECANFV
RVLQPHNRTHLLACGTGAFQPTCALITVGHRGEHVLHLEPGSVESGRGRCPHEPSRPFAS
TFIDGELYTGLTADFLGREAMIFRSGGPRPALRSDSDQSLLHDPRFVMAARIPENSDQDN
DKVYFFFSETVPSPDGGSNHVTVSRVGRVCVNDAGGQRVLVNKWSTFLKARLVCSVPGPG
GAETHFDQLEDVFLLWPKAGKSLEVYALFSTVSAVFQGFAVCVYHMADIWEVFNGPFAHR
DGPQHQWGPYGGKVPFPRPGVCPSKMTAQPGRPFGSTKDYPDEVLQFARAHPLMFWPVRP
RHGRPVLVKTHLAQQLHQIVVDRVEAEDGTYDVIFLGTDSGSVLKVIALQAGGSAEPEEV
VLEELQVFKVPTPITEMEISVKRQMLYVGSRLGVAQLRLHQCETYGTACAECCLARDPYC
AWDGASCTHYRPSLGKRRFRRQDIRHGNPALQCLGQSQEEEAVGLVAATMVYGTEHNSTF
LECLPKSPQAAVRWLLQRPGDEGPDQVKTDERVLHTERGLLFRRLSRFDAGTYTCTTLEH
GFSQTVVRLALVVIVASQLDNLFPPEPKPEEPPARGGLASTPPKAWYKDILQLIGFANLP
RVDEYCERVWCRGTTECSGCFRSRSRGKQARGKSWAGLELGKKMKSRVHAEHNRTPREVE
AT
NT seq 2349 nt NT seq  +upstreamnt  +downstreamnt
atggccccctcggcctgggccatttgctggctgctagggggcctcctgctccatgggggt
agctctggccccagccccggccccagtgtgccccgcctgcggctctcctaccgagacctc
ctgtctgccaaccgctctgccatctttctgggcccccagggctccctgaacctccaggcc
atgtacctagatgagtaccgagaccgcctctttctgggtggcctggacgccctctactct
ctgcggctggaccaggcatggccagatccccgggaggtcctgtggccaccgcagccagga
cagagggaggagtgtgttcgaaagggaagagatcctttgacagagtgcgccaacttcgtg
cgggtgctacagcctcacaaccggacccacctgctagcctgtggcactggggccttccag
cccacctgtgccctcatcacagttggccaccgtggggagcatgtgctccacctggagcct
ggcagtgtggaaagtggccgggggcggtgccctcacgagcccagccgtccctttgccagc
accttcatagacggggagctgtacacgggtctcactgctgacttcctggggcgagaggcc
atgatcttccgaagtggaggtcctcggccagctctgcgttccgactctgaccagagtctc
ttgcacgacccccggtttgtgatggccgcccggatccctgagaactctgaccaggacaat
gacaaggtgtacttcttcttctcggagacggtcccctcgcccgatggtggctcgaaccat
gtcactgtcagccgcgtgggccgcgtctgcgtgaatgatgctgggggccagcgggtgctg
gtgaacaaatggagcactttcctcaaggccaggctggtctgctcggtgcccggccctggt
ggtgccgagacccactttgaccagctagaggatgtgttcctgctgtggcccaaggccggg
aagagcctcgaggtgtacgcgctgttcagcaccgtcagtgccgtgttccagggcttcgcc
gtctgtgtgtaccacatggcagacatctgggaggttttcaacgggccctttgcccaccga
gatgggcctcagcaccagtgggggccctatgggggcaaggtgcccttccctcgccctggc
gtgtgccccagcaagatgaccgcacagccaggacggccttttggcagcaccaaggactac
ccagatgaggtgctgcagtttgcccgagcccaccccctcatgttctggcctgtgcggcct
cgacatggccgccctgtccttgtcaagacccacctggcccagcagctacaccagatcgtg
gtggaccgcgtggaggcagaggatgggacctacgatgtcattttcctggggactgactca
gggtctgtgctcaaagtcatcgctctccaggcagggggctcagctgaacctgaggaagtg
gttctggaggagctccaggtgtttaaggtgccaacacctatcaccgaaatggagatctct
gtcaaaaggcaaatgctatacgtgggctctcggctgggtgtggcccagctgcggctgcac
caatgtgagacttacggcactgcctgtgcagagtgctgcctggcccgggacccatactgt
gcctgggatggtgcctcctgtacccactaccgccccagccttggcaagcgccggttccgc
cggcaggacatccggcacggcaaccctgccctgcagtgcctgggccagagccaggaagaa
gaggcagtgggacttgtggcagccaccatggtctacggcacggagcacaatagcaccttc
ctggagtgcctgcccaagtctccccaggctgctgtgcgctggctcttgcagaggccaggg
gatgaggggcctgaccaggtgaagacggacgagcgagtcttgcacacggagcgggggctg
ctgttccgcaggcttagccgtttcgatgcgggcacctacacctgcaccactctggagcat
ggcttctcccagactgtggtccgcctggctctggtggtgattgtggcctcacagctggac
aacctgttccctccggagccaaagccagaggagcccccagcccggggaggcctggcttcc
accccacccaaggcctggtacaaggacatcctgcagctcattggcttcgccaacctgccc
cgggtggatgagtactgtgagcgcgtgtggtgcaggggcaccacggaatgctcaggctgc
ttccggagccggagccggggcaagcaggccaggggcaagagctgggcagggctggagcta
ggcaagaagatgaagagccgggtgcatgccgagcacaatcggacgccccgggaggtggag
gccacgtag

KEGG   Homo sapiens (human): 6405Help
Entry
6405              CDS       T01001                                 

Gene name
SEMA3F, SEMA-IV, SEMA4, SEMAK
Definition
(RefSeq) semaphorin 3F
  KO
K06840  semaphorin 3
Organism
hsa  Homo sapiens (human)
Pathway
hsa04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    6405 (SEMA3F)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Sema Ig_3 I-set ig V-set PSI Ig_2
Motif
Other DBs
NCBI-GeneID: 6405
NCBI-ProteinID: NP_004177
OMIM: 601124
HGNC: 10728
Ensembl: ENSG00000001617
Vega: OTTHUMG00000156806
Pharos: Q13275(Tbio)
UniProt: Q13275
LinkDB All DBs
Position
3p21.31
AA seq 785 aa AA seqDB search
MLVAGLLLWASLLTGAWPSFPTQDHLPATPRVRLSFKELKATGTAHFFNFLLNTTDYRIL
LKDEDHDRMYVGSKDYVLSLDLHDINREPLIIHWAASPQRIEECVLSGKDVNGECGNFVR
LIQPWNRTHLYVCGTGAYNPMCTYVNRGRRAQATPWTQTQAVRGRGSRATDGALRPMPTA
PRQDYIFYLEPERLESGKGKCPYDPKLDTASALINEELYAGVYIDFMGTDAAIFRTLGKQ
TAMRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQSPAVYARIGRIC
LNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQDVFVQQTQDVRNPVIYAVFT
SSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGPNYQWMPFSGKMPYPRPGTCPGGTFTPS
MKSTKDYPDEVINFMRSHPLMYQAVYPLQRRPLVVRTGAPYRLTTIAVDQVDAADGRYEV
LFLGTDRGTVQKVIVLPKDDQELEELMLEEVEVFKDPAPVKTMTISSKRQQLYVASAVGV
THLSLHRCQAYGAACADCCLARDPYCAWDGQACSRYTASSKRRSRRQDVRHGNPIRQCRG
FNSNANKNAVESVQYGVAGSAAFLECQPRSPQATVKWLFQRDPGDRRREIRAEDRFLRTE
QGLLLRALQLSDRGLYSCTATENNFKHVVTRVQLHVLGRDAVHAALFPPLSMSAPPPPGA
GPPTPPYQELAQLLAQPEVGLIHQYCQGYWRHVPPSPREAPGAPRSPEPQDQKKPRNRRH
HPPDT
NT seq 2358 nt NT seq  +upstreamnt  +downstreamnt
atgcttgtcgccggtcttcttctctgggcttccctactgaccggggcctggccatccttc
cccacccaggaccacctcccggccacgccccgggtccggctctcattcaaagagctgaag
gccacaggcaccgcccacttcttcaacttcctgctcaacacaaccgactaccgaatcttg
ctcaaggacgaggaccacgaccgcatgtacgtgggcagcaaggactacgtgctgtccctg
gacctgcacgacatcaaccgcgagcccctcattatacactgggcagcctccccacagcgc
atcgaggaatgcgtgctctcaggcaaggatgtcaacggcgagtgtgggaacttcgtcagg
ctcatccagccctggaaccgaacacacctgtatgtgtgcgggacaggtgcctacaacccc
atgtgcacctatgtgaaccgcggacgccgcgcccaggccacaccatggacccagactcag
gcggtcagaggccgcggcagcagagccacggatggtgccctccgcccgatgcccacagcc
ccacgccaggattacatcttctacctggagcctgagcgactcgagtcagggaagggcaag
tgtccgtacgatcccaagctggacacagcatcggccctcatcaatgaggagctctatgct
ggtgtgtacatcgattttatgggcactgatgcagccatcttccgcacacttggaaagcag
acagccatgcgcacggatcagtacaactcccggtggctgaacgacccgtcgttcatccat
gctgagctcattcctgacagtgcggagcgcaatgatgataagctttacttcttcttccgt
gagcggtcggcagaggcgccgcagagccccgcggtgtacgcccgcatcgggcgcatttgc
ctgaacgatgacggtggtcactgttgcctggtcaacaagtggagcacattcctgaaggcg
cggctcgtctgctctgtcccgggcgaggatggcattgagactcactttgatgagctccag
gacgtgtttgtccagcagacccaggacgtgaggaaccctgtcatttacgctgtctttacc
tcctctggctccgtgttccgaggctctgccgtgtgtgtctactccatggctgatattcgc
atggtcttcaacgggccctttgcccacaaagaggggcccaactaccagtggatgcccttc
tcagggaagatgccctacccacggccgggcacgtgccctggtggaaccttcacgccatct
atgaagtccaccaaggattatcctgatgaggtgatcaacttcatgcgcagccacccactc
atgtaccaggccgtgtaccctctgcagcggcggcccctggtagtccgcacaggtgctccc
taccgccttaccactattgccgtggaccaggtggatgcagccgacgggcgctatgaggtg
cttttcctgggcacagaccgcgggacagtgcagaaggtcattgtgctgcccaaggatgac
caggagttggaggagctcatgctggaggaggtggaggtcttcaaggatccagcacccgtc
aagaccatgaccatctcttctaagaggcaacaactctacgtggcgtcagccgtgggtgtc
acacacctgagcctgcaccgctgccaggcgtatggggctgcctgtgctgactgctgcctt
gcccgggacccttactgtgcctgggatggccaggcctgctcccgctatacagcatcctcc
aagaggcggagccgccggcaggacgtccggcacggaaaccccatcaggcagtgccgtggg
ttcaactccaatgccaacaagaatgccgtggagtctgtgcagtatggcgtggccggcagc
gcagccttccttgagtgccagccccgctcgccccaagccactgttaagtggctgttccag
cgagatcctggtgaccggcgccgagagattcgtgcagaggaccgcttcctgcgcacagag
cagggcttgttgctccgtgcactgcagctcagcgatcgtggcctctactcctgcacagcc
actgagaacaactttaagcacgtcgtcacacgagtgcagctgcatgtactgggccgggac
gccgtccatgctgccctcttcccaccactgtccatgagcgccccgccacccccaggcgca
ggccccccaacgcctccttaccaggagttagcccagctgctggcccagccagaagtgggc
ctcatccaccagtactgccagggttactggcgccatgtgccccccagccccagggaggct
ccaggggcaccccggtctcctgagccccaggaccagaaaaagccccggaaccgccggcac
caccctccggacacatga

KEGG   Homo sapiens (human): 7869Help
Entry
7869              CDS       T01001                                 

Gene name
SEMA3B, LUCA-1, SEMA5, SEMAA, SemA, semaV
Definition
(RefSeq) semaphorin 3B
  KO
K06840  semaphorin 3
Organism
hsa  Homo sapiens (human)
Pathway
hsa04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    7869 (SEMA3B)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Sema ig V-set Ig_3 PSI I-set
Motif
Other DBs
NCBI-GeneID: 7869
NCBI-ProteinID: NP_001276989
OMIM: 601281
HGNC: 10724
Ensembl: ENSG00000012171
Vega: OTTHUMG00000156970
Pharos: Q13214(Tbio)
UniProt: Q13214
LinkDB All DBs
Position
3p21.31
AA seq 749 aa AA seqDB search
MGRAGAAAVIPGLALLWAVGLGSAAPSPPRLRLSFQELQAWHGLQTFSLERTCCYQALLV
DEERGRLFVGAENHVASLNLDNISKRAKKLAWPAPVEWREECNWAGKDIGTECMNFVKLL
HAYNRTHLLACGTGAFHPTCAFVEVGHRAEEPVLRLDPGRIEDGKGKSPYDPRHRAASVL
VGEELYSGVAADLMGRDFTIFRSLGQRPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDD
KIYFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEG
DTHFDQLQDVFLLSSRDHRTPLLYAVFSTSSSIFQGSAVCVYSMNDVRRAFLGPFAHKEG
PMHQWVSYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPTGGRPL
FLQVGANYTFTQIAADRVAAADGHYDVLFIGTDVGTVLKVISVPKGSRPSAEGLLLEELH
VFEDSAAVTSMQISSKRHQLYVASRSAVAQIALHRCAAHGRVCTECCLARDPYCAWDGVA
CTRFQPSAKRRFRRQDVRNGDPSTLCSGDSSRPALLEHKVFGVEGSSAFLECEPRSLQAR
VEWTFQRAGVTAHTQVLAEERTERTARGLLLRRLRRRDSGVYLCAAVEQGFTQPLRRLSL
HVLSATQAERLARAEEAAPAAPPGPKLWYRDFLQLVEPGGGGSANSLRMCRPQPALQSLP
LESRRKGRNRRTHAPEPRAERGPRSATHW
NT seq 2250 nt NT seq  +upstreamnt  +downstreamnt
atggggcgggccggggctgccgccgtgatcccgggcctggccctgctctgggcagtgggg
ctggggagtgccgcccccagccccccacgccttcggctctccttccaagagctccaggcc
tggcatggtctccagactttcagcctggagcgaacctgctgctaccaggccttgctggtg
gatgaggagcgtggacgcctgtttgtgggtgccgagaaccatgtggcctccctcaacctg
gacaacatcagcaagcgggccaagaagctggcctggccggcccctgtggaatggcgagag
gagtgcaactgggcagggaaggacattggtactgagtgcatgaacttcgtgaagttgctg
catgcctacaaccgcacccatttgctggcctgtggcacgggagccttccacccaacctgt
gcctttgtggaagtgggccaccgggcagaggagcccgtcctccggctggacccaggaagg
atagaggatggcaaggggaagagtccttatgaccccaggcatcgggctgcctccgtgctg
gtgggggaggagctatactcaggggtggcagcagacctcatgggacgagactttaccatc
tttcgcagcctagggcaacgtccaagtctccgaacagagccacacgactcccgctggctc
aatgagcccaagtttgtcaaggtattttggatcccggagagcgagaacccagacgacgac
aaaatctacttcttctttcgtgagacggcggtagaggcggcgccggcactgggacgcctg
tccgtgtcccgcgttggccagatctgccggaacgacgtgggcggccagcgcagcctggtc
aacaagtggacgacgttcctgaaggcgcggctggtgtgctcggtgcccggcgtcgagggc
gacacccacttcgatcagctccaggatgtgtttctgttgtcctcgcgggaccaccggacc
ccgctgctctatgccgtcttctccacgtccagcagcatcttccagggctctgcggtgtgc
gtgtacagcatgaacgacgtgcgccgggccttcttgggaccctttgcacacaaggagggg
cccatgcaccagtgggtgtcataccagggtcgcgtcccctacccgcggccaggcatgtgc
cccagcaagacctttggcaccttcagttccaccaaggacttcccagacgatgtcatccag
tttgcgcggaaccaccccctcatgtacaactctgtcctgcccactggggggcgccctctt
ttcctacaagttggagccaattacaccttcactcaaattgccgcggaccgggttgcagcc
gctgacggacactatgacgtcctcttcattggcacagacgttggcacggtgctgaaggtg
atctcggtccccaagggcagtaggcccagcgcagaggggctgctcctggaggagctgcac
gtgtttgaggactcggccgctgtcaccagcatgcaaatttcttccaagaggcaccagctg
tacgtagcctcgcggagcgcggtggcccagatcgcgttgcaccgctgcgctgcccacggc
cgcgtctgcaccgaatgctgtctggcgcgtgacccctactgcgcctgggacggggtcgcg
tgcacgcgcttccagcccagtgccaagaggcggttccggcggcaagacgtaaggaatggc
gaccccagcacgttgtgctccggagactcgtctcgtcccgcgctgctggaacacaaggtg
ttcggcgtggagggcagcagcgcctttctggagtgtgagccccgctcgctgcaggcgcgc
gtggagtggactttccagcgcgcaggggtgacagcccacacccaggtgctggcagaggag
cgcaccgagcgcaccgcccggggactactgctgcgcaggctgcggcgccgggactcgggc
gtgtacttgtgcgccgccgtcgagcagggctttacgcaaccgctgcgtcgcctgtcgctg
cacgtgttgagtgctacgcaggccgaacgactggcgcgggccgaggaggctgcgcccgcc
gcgccgccgggccccaaactctggtaccgggactttctgcagctggtggagccgggcgga
ggtggcagcgcgaactccctgcgcatgtgccgcccgcagcctgcgctgcagtcactgccc
ctggagtcgcggagaaagggccgtaaccggaggacccacgcccctgagcctcgcgctgag
cgggggccgcgcagcgcaacgcactggtga

KEGG   Homo sapiens (human): 9723Help
Entry
9723              CDS       T01001                                 

Gene name
SEMA3E, M-SEMAH, M-SemaK, SEMAH, coll-5
Definition
(RefSeq) semaphorin 3E
  KO
K06840  semaphorin 3
Organism
hsa  Homo sapiens (human)
Pathway
hsa04360  Axon guidance
Disease
H00556  CHARGE syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    9723 (SEMA3E)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Sema ig V-set Ig_3 Ig_2 PSI
Motif
Other DBs
NCBI-GeneID: 9723
NCBI-ProteinID: NP_036563
OMIM: 608166
HGNC: 10727
Ensembl: ENSG00000170381
Vega: OTTHUMG00000154693
Pharos: O15041(Tbio)
UniProt: O15041
LinkDB All DBs
Position
7q21.11
AA seq 775 aa AA seqDB search
MASAGHIITLLLWGYLLELWTGGHTADTTHPRLRLSHKELLNLNRTSIFHSPFGFLDLHT
MLLDEYQERLFVGGRDLVYSLSLERISDGYKEIHWPSTALKMEECIMKGKDAGECANYVR
VLHHYNRTHLLTCGTGAFDPVCAFIRVGYHLEDPLFHLESPRSERGRGRCPFDPSSSFIS
TLIGSELFAGLYSDYWSRDAAIFRSMGRLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRD
DNKVYFFFTEKALEAENNAHAIYTRVGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGMN
GIDTYFDELEDVFLLPTRDHKNPVIFGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHK
EGPEYHWSVYEGKVPYPRPGSCASKVNGGRYGTTKDYPDDAIRFARSHPLMYQAIKPAHK
KPILVKTDGKYNLKQIAVDRVEAEDGQYDVLFIGTDNGIVLKVITIYNQEMESMEEVILE
ELQIFKDPVPIISMEISSKRQQLYIGSASAVAQVRFHHCDMYGSACADCCLARDPYCAWD
GISCSRYYPTGTHAKRRFRRQDVRHGNAAQQCFGQQFVGDALDKTEEHLAYGIENNSTLL
ECTPRSLQAKVIWFVQKGRETRKEEVKTDDRVVKMDLGLLFLRLHKSDAGTYFCQTVEHS
FVHTVRKITLEVVEEEKVEDMFNKDDEEDRHHRMPCPAQSSISQGAKPWYKEFLQLIGYS
NFQRVEEYCEKVWCTDRKRKKLKMSPSKWKYANPQEKKLRSKPEHYRLPRHTLDS
NT seq 2328 nt NT seq  +upstreamnt  +downstreamnt
atggcatccgcggggcacattatcaccttgctcctgtggggttacttactggagctttgg
acaggaggtcatacagctgatactacccacccccggttacgcctgtcacataaagagctc
ttgaatctgaacagaacatcaatatttcatagcccttttggatttcttgatctccataca
atgctgctggatgaatatcaagagaggctcttcgtgggaggcagggaccttgtatattcc
ctcagcttggagagaatcagtgacggctataaagagatacactggccgagtacagctcta
aaaatggaagaatgcataatgaagggaaaagatgcgggtgaatgtgcaaattatgttcgg
gttttgcatcactataacaggacacaccttctgacctgtggtactggagcttttgatcca
gtttgtgccttcatcagagttggatatcatttggaggatcctctgtttcacctggaatca
cccagatctgagagaggaaggggcagatgtccttttgaccccagctcctccttcatctcc
actttaattggtagtgaattgtttgctggactctacagtgactactggagcagagacgct
gcgatcttccgcagcatggggcgactggcccatatccgcactgagcatgacgatgagcgt
ctgttgaaagaaccaaaatttgtaggttcatacatgattcctgacaatgaagacagagat
gacaacaaagtatatttcttttttactgagaaggcactggaggcagaaaacaatgctcac
gcaatttacaccagggtcgggcgactctgtgtgaatgatgtaggagggcagagaatactg
gtgaataagtggagcactttcctaaaagcgagactcgtttgctcagtaccaggaatgaat
ggaattgacacatattttgatgaattagaggacgtttttttgctacctaccagagatcat
aagaatccagtgatatttggactctttaacactaccagtaatatttttcgagggcatgct
atatgtgtctatcacatgtctagcattcgggcagccttcaacggaccatatgcacataag
gaaggacctgaataccactggtcagtctatgaaggaaaagtcccttatccaaggcctggt
tcttgtgccagcaaagtaaatggagggagatacggaaccaccaaggactatcctgatgat
gccatccgatttgcaagaagtcatccactaatgtaccaggccataaaacctgcccataaa
aaaccaatattggtaaaaacagatggaaaatataacctgaaacaaatagcagtagatcga
gtggaagctgaggatggccaatatgacgtcttgtttattgggacagataatggaattgtg
ctgaaagtaatcacaatttacaaccaagaaatggaatcaatggaagaagtaattctagaa
gaacttcagatattcaaggatccagttcctattatttctatggagatttcttcaaagcgg
caacagctgtatattggatctgcttctgctgtggctcaagtcagattccatcactgtgac
atgtatggaagtgcttgtgctgactgctgcctggctcgagacccttactgtgcctgggat
ggcatatcctgctcccggtattacccaacaggcacacatgcaaaaaggcgtttccggaga
caagatgttcgacatggaaatgcagctcagcagtgctttggacaacagtttgttggggat
gctttggataagactgaagaacatctggcttatggcatagagaacaacagtactttgctg
gaatgtaccccacgatctttacaagcgaaagttatctggtttgtacagaaaggacgtgag
acaagaaaagaggaggtgaagacagatgacagagtggttaagatggaccttggtttactc
ttcctaaggttacacaaatcagatgctgggacctatttttgccagacagtagagcatagc
tttgtccatacggtccgtaaaatcaccttggaggtagtggaagaggagaaagtcgaggat
atgtttaacaaggacgatgaggaggacaggcatcacaggatgccttgtcctgctcagagt
agcatctcgcagggagcaaaaccatggtacaaggaattcttgcagctgatcggttatagc
aacttccagagagtggaagaatactgcgagaaagtatggtgcacagatagaaagaggaaa
aagcttaaaatgtcaccctccaagtggaagtatgccaaccctcaggaaaagaagctccgt
tccaaacctgagcattaccgcctgcccaggcacacgctggactcctga

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