KEGG   Homo sapiens (human): 11063Help
Entry
11063             CDS       T01001                                 

Gene name
SOX30
Definition
(RefSeq) SRY-box transcription factor 30
  KO
K09271  transcription factor SOX15/30
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    11063 (SOX30)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    11063 (SOX30)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: HMG_box HMG_box_2
Motif
Other DBs
NCBI-GeneID: 11063
NCBI-ProteinID: NP_848511
OMIM: 606698
HGNC: 30635
Ensembl: ENSG00000039600
Vega: OTTHUMG00000130247
Pharos: O94993(Tbio)
UniProt: O94993
LinkDB All DBs
Position
5q33.3
AA seq 753 aa AA seqDB search
MERARPEPPPQPRPLRPAPPPLPVEGTSFWAAAMEPPPSSPTLSAAASATLASSCGEAVA
SGLQPAVRRLLQVKPEQVLLLPQPQAQNEEAAASSAQARLLQFRPDLRLLQPPTASDGAT
SRPELHPVQPLALHVKAKKQKLGPSLDQSVGPRGAVETGPRASRVVKLEGPGPALGYFRG
DEKGKLEAEEVMRDSMQGGAGKSPAAIREGVIKTEEPERLLEDCRLGAEPASNGLVHGSA
EVILAPTSGAFGPHQQDLRIPLTLHTVPPGARIQFQGAPPSELIRLTKVPLTPVPTKMQS
LLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANP
AANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKRKRFPLSV
SNVFSGTTQNIISTNPTTVYPYRSPTYSVVIPSLQNPITHPVGETSPAIQLPTPAVQSPS
PVTLFQPSVSSAAQVAVQDPSLPVYPALPPQRFTGPSQTDTHQLHSEATHTVKQPTPVSL
ESANRISSSASTAHARFATSTIQPPREYSSVSPCPRSAPIPQASPIPHPHVYQPPPLGHP
ATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSMPECLSYYEDRYPKHE
GIFSTLNRDYSFRDYSSECTHSENSRSCENMNGTSYYNSHSHSGEENLNPVPQLDIGTLE
NVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRDL
NT seq 2262 nt NT seq  +upstreamnt  +downstreamnt
atggagagagccagacccgagccgccgcctcagccgcgcccgttgcgtcccgctccgccc
ccgctgccggtcgagggcacctccttttgggcagcagccatggagccccctccgtcgtct
cccacactgagcgcggcagccagtgcgaccttggcctcgtcgtgcggggaggcagtggcg
tccggcttacagcccgcggtgcggcggctgctgcaggtgaagccagagcaggtgttgctg
ctaccacagcctcaggcccagaacgaggaagccgctgcctcgtccgcgcaggcgcggctg
ttgcagttcaggcccgacctgcggctcctgcagccgccgacagcgtcagacggcgccacc
tccaggcccgagttgcacccggtgcagcccctggcgctgcatgtcaaggccaagaagcag
aagctggggcccagcctggatcagtcagtggggcctcgaggggccgtcgaaaccggtcct
agagcctccagggtggtcaagttggaaggccccgggccggccctcggctacttccgaggg
gacgagaagggcaagctggaggcggaggaggtcatgagagactcgatgcaaggcggggca
ggcaaaagcccggcagccatccgagaaggtgtgatcaaaacggaggaacccgagagactc
ctcgaggactgcaggctcggcgcggagcccgcgtccaatggcctggttcatggcagcgcg
gaggtcatcttggccccaacgtccggtgcctttgggccgcaccagcaagaccttaggatc
cctttgacgctccacacggtcccccctggggcccggatccagtttcagggagctccgcct
tcagagctgataagattgaccaaggtccccctgacaccagtgcctactaaaatgcagtcc
ctactggagccttctgtaaaaattgaaaccaaagatgtcccgctcaccgtgttgccctca
gatgcaggcataccagatactcccttcagtaaggacagaaatggtcatgtgaagcgaccc
atgaacgcatttatggtttgggcaaggatccaccgaccagcactagccaaagctaaccca
gcagccaacaatgcagaaatcagtgtccagcttgggttagagtggaacaaacttagtgaa
gaacaaaagaaaccctattacgatgaagcacaaaagattaaggaaaagcacagagaggaa
tttcctggttgggtttatcagcctcgtccagggaagcgaaaacgattccctctaagtgtt
tccaatgtattttctggtaccacacagaatatcatctctacaaatcctacaacagtttat
ccttaccgctcacctacgtactctgtggtaattcccagcctacagaatcccatcactcat
ccagttggtgaaacctcacctgctatccagctgcccacacctgcagtccagagcccaagc
cctgtcacacttttccagcccagcgtctccagtgctgctcaggtggctgtccaggatcca
agtctacctgtctatccagcactcccaccccaacgctttactgggccttcccaaacagac
actcatcagctgcattctgaagccactcacactgtgaagcaacccactcctgtctctcta
gagagcgccaacaggatttcaagtagtgcaagtactgcccatgccagatttgcaacttcg
accatccaacctcctagggagtattccagcgtttccccttgtcccagaagtgctccaatc
ccccaggcttctcccattccacacccacatgtctaccagccccctccccttggccatcca
gccacactgttcgggacaccaccaagattctcttttcatcacccttacttcctacccgga
cctcactacttcccatcaagtacatgcccttacagtcggcctccctttggctatggaaat
tttccgagttcaatgccagaatgccttagttattatgaagacaggtacccaaaacatgag
ggtatcttttcaactttaaatagagactattcttttagagactactcaagtgaatgcaca
cacagtgaaaattctcggagttgtgagaacatgaatggaacttcttactataacagtcat
agccacagtggggaagaaaacttaaaccctgtgcctcagctggacattggaaccttggag
aatgtcttcacagccccgacatcaactccttctagcatccagcaagtcaatgtcaccgac
agtgatgaggaggaagaagaaaaagtgctcagggatttataa

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