Acetivibrio saccincola: HVS_10895
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Entry
HVS_10895 CDS
T05223
Symbol
degU
Name
(GenBank) Transcriptional regulatory protein DegU
KO
K07692
two-component system, NarL family, response regulator DegU
Organism
hsc
Acetivibrio saccincola
Pathway
hsc02020
Two-component system
hsc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hsc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HVS_10895 (degU)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HVS_10895 (degU)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
hsc02022
]
HVS_10895 (degU)
Two-component system [BR:
hsc02022
]
NarL family
DegS-DegU (multicellular behavior control)
HVS_10895 (degU)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_10
Sigma70_ECF
HTH_24
HTH_23
HTH_38
DUF5678
HTH_29
DUF2089
HTH_40
HTH_11
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AUG58074
UniProt:
A0A2K9ED60
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All DBs
Position
complement(2387013..2387696)
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AA seq
227 aa
AA seq
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MNKTLEKIHVAIADDHAMVREGLKQILELEDDIEVIAQASNGEEALDIAREKQPDVILMD
INMPGMNGLQAIKEIKNEKVPSKIIVLTIHEDREYLFKTLHMGAEGYVLKDADPNILIEA
IRSVNSGEAYIQGNMTKELIKEFKRITSNTKEKSEDSNLTSREKEVLALIAEGLINREIA
KRLYISEKTVKNHVSNIFKKLNVTDRTQAAIYAYKNNITSQTTQDHL
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaacattggagaaaatacatgttgccatagcagatgatcatgccatggtgagg
gaagggctaaaacaaatattagagctggaagatgatattgaagttatagcacaggcatca
aatggagaagaagcattggacattgcaagggaaaaacagccagatgttatattaatggat
attaacatgccggggatgaatgggttgcaggcaataaaggagataaaaaatgaaaaggtg
ccgtcaaaaattattgttttaactatacatgaggacagggagtatttgtttaaaaccctg
catatgggtgcagaggggtatgttttaaaagatgcggatcctaatattttaatagaggct
atccggagtgtaaattcgggagaggcttatatacaagggaatatgacaaaagaactgatt
aaagagtttaagaggattacttcaaataccaaagagaaaagtgaagacagcaacttaact
tcaagggaaaaagaagttttggcgctgatagcagaaggactgattaacagggaaattgca
aaaagactttatatcagtgaaaaaaccgttaaaaaccatgtttcaaatatatttaaaaag
cttaatgtgacagacaggacacaggctgcaatatatgcttataaaaataacattacaagc
cagacaacccaggatcacctttag
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