Acetivibrio saccincola: HVS_12125
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Entry
HVS_12125 CDS
T05223
Symbol
hup2
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
hsc
Acetivibrio saccincola
Brite
KEGG Orthology (KO) [BR:
hsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsc03032
]
HVS_12125 (hup2)
03036 Chromosome and associated proteins [BR:
hsc03036
]
HVS_12125 (hup2)
03400 DNA repair and recombination proteins [BR:
hsc03400
]
HVS_12125 (hup2)
DNA replication proteins [BR:
hsc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HVS_12125 (hup2)
Chromosome and associated proteins [BR:
hsc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HVS_12125 (hup2)
DNA repair and recombination proteins [BR:
hsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HVS_12125 (hup2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AUG58302
UniProt:
A0A2K9E3J5
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All DBs
Position
2651205..2651480
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AA seq
91 aa
AA seq
DB search
MNKTDLINSIAAKSGLSKKNSEAALNAFISSVQDALKAGEKVALVGFGTFEVRDRAARKG
RNPQTKEEITIPASKAPVFRAGKALKEIVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagatttgataaactcaattgctgctaaatcaggtttaagcaaaaagaac
agtgaagccgctttaaatgcatttatttcttctgtacaggacgctttaaaagccggtgaa
aaagttgctcttgttggctttggtacatttgaagtaagagacagggcagccagaaaagga
agaaatcctcagacaaaagaagaaatcacaatccccgcatcaaaagctcccgtatttaga
gcaggtaaggcattaaaggaaattgttaataagtaa
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