Herbinix luporum: SD1D_0002
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Entry
SD1D_0002 CDS
T04072
Name
(GenBank) hypothetical protein
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
hsd
Herbinix luporum
Pathway
hsd03030
DNA replication
hsd03430
Mismatch repair
hsd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SD1D_0002
03430 Mismatch repair
SD1D_0002
03440 Homologous recombination
SD1D_0002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsd03032
]
SD1D_0002
03400 DNA repair and recombination proteins [BR:
hsd03400
]
SD1D_0002
Enzymes [BR:
hsd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SD1D_0002
DNA replication proteins [BR:
hsd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SD1D_0002
DNA repair and recombination proteins [BR:
hsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SD1D_0002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
CUH91577
UniProt:
A0A0K8J249
LinkDB
All DBs
Position
I:1610..2719
Genome browser
AA seq
369 aa
AA seq
DB search
MKIRCQKSDLLNSVNIVLKAVPTKTTMPILECLIIEANNYGIKLIANDMELGIETMVKGT
IMEEGIVALNAKVFSEIVRRLPENEVYISVDENYTTEIICEKAKFAISGRSGDEFPSLQE
VERENPLTLSQFTLKEVIRQTVFSISDNESNKIMTGELFDIKNNELRVISLDGHRISIRK
IIMKEEYEERKVIIPGKTLNEISKILSGEVDSFVNIFFTDKHALFEFDDTLVVTRLIDGE
YYRIDQMLSSDYETKVTINKKELLSCIERASLLIRENDKKPIIIRVSDNNFELNINTSLG
SMKEDVDIVMEGKDIVIGFNPKFLMDALRVIDDETVDIYLINPKAPCFIRNKEQSYIYLI
LPVNINVGA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacgttgccaaaaatctgatctattaaatagtgttaatatcgtacttaaagcc
gtacctactaaaacaactatgcctatattggaatgtttgattatagaagctaataattat
ggaattaaattaattgccaatgatatggaacttggaatagaaacaatggttaagggtact
ataatggaagagggaatagttgccttaaacgcaaaagttttttctgaaatagtaagaaga
cttccggaaaatgaagtatatatatctgttgatgagaactacaccacagaaataatatgc
gagaaagctaaatttgccatatccggaagatcaggcgacgaatttccttcccttcaagaa
gtagaaagagaaaatcctcttaccttatcacaatttaccttaaaagaagttatcagacag
accgtattttctatatcagataatgaaagcaacaagattatgaccggtgaactgtttgat
ataaaaaataatgaattaagggtaatatctttagatggtcatagaatttctattcgaaaa
atcattatgaaagaagaatatgaagaaagaaaagtcataattcccggtaagaccttaaat
gaaattagcaaaatattatcaggagaggtagattcttttgttaatatattctttaccgat
aagcatgccttgtttgaatttgatgatacattagttgtaacaaggcttattgatggtgag
tattacaggatagatcagatgctatctagtgattatgagactaaggttacaataaataaa
aaagaattacttagttgtatagaaagagcttctctattaatcagagaaaatgacaagaaa
ccaattattattcgtgtcagtgataataattttgagttaaatattaatacatctttagga
tctatgaaagaagatgtagacattgtaatggagggtaaagacattgttattggcttcaac
cctaaatttttaatggatgctttaagagtaattgatgatgaaacagtagatatatactta
ataaatcctaaagctccatgctttatccgtaataaggagcaaagttatatatatttaata
ttacctgttaatataaatgttggggcataa
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