Herbinix luporum: SD1D_0246
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Entry
SD1D_0246 CDS
T04072
Symbol
ddl
Name
(GenBank) D-alanine-D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
hsd
Herbinix luporum
Pathway
hsd00470
D-Amino acid metabolism
hsd00550
Peptidoglycan biosynthesis
hsd01100
Metabolic pathways
hsd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SD1D_0246 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SD1D_0246 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SD1D_0246 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hsd01011
]
SD1D_0246 (ddl)
Enzymes [BR:
hsd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SD1D_0246 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
hsd01011
]
Precursor biosynthesis
Amino acid ligase
SD1D_0246 (ddl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_3
ATP-grasp_4
RimK
GARS_A
Toxin_31
GSP_synth
Motif
Other DBs
NCBI-ProteinID:
CUH91799
UniProt:
A0A0K8J363
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Position
I:complement(251748..252779)
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AA seq
343 aa
AA seq
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MKIVVLAGGTSPERDVSLSTGKMIYKALKNKGHQTILLDVYLGYEGDTSNLFDIEKDWAE
GIGNIGTYNPDIKEIKALRKGNPDHFFGPGVLEICDMADIVFLALHGENGEDGRIQAAFD
LMGIKYTGTDYASSTIAMDKAVSKELFTYYNIPSPKGIYVRKGEEYTWDSFPCVVKVNNG
GSSVGVSIVHSADEMDAAIDNALSYGDQLIIEQYIKGREFSVGVIDGKALPVIEIAPISG
FYDYKNKYQAGNAIETCPADLDEAISKQMQDFAVMVFKALRLKTYARMDFLLNDKNEIYC
LEANTLPGMTPTSLLPQEAKAIGIDFEDLCELIIDISLKKYNK
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtagtattagcagggggaaccagtcccgaacgagatgtatctctttctaca
ggaaagatgatttataaagctttaaaaaataagggacaccaaaccatactattagatgta
tatttaggttacgaaggagatacaagtaatctatttgatatagaaaaagactgggccgaa
ggaatcggcaatatcggtacctataatccagatataaaggaaattaaagccctaagaaaa
ggcaatccagatcacttcttcggaccgggggtactggaaatatgcgacatggcagatatc
gtatttttagcactccacggggaaaacggtgaagacggcagaatccaggctgcctttgac
ctaatgggtattaaatataccggtaccgattatgccagcagtaccattgctatggataag
gctgtctccaaagaactgtttacatattataatatccctagtcctaaaggtatctatgtt
agaaagggagaagaatatacttgggatagctttccttgcgttgttaaggtaaataatggt
ggttccagtgtaggtgtatccattgtgcattcagctgatgaaatggatgctgccattgat
aatgccctatcctatggggaccaacttattatagaacaatatattaaaggtagggagttt
tctgtaggagtaattgacggaaaggctttacctgttattgagattgcccctatttcaggt
ttttacgattataaaaataaatatcaggcaggcaatgccattgaaacatgtcctgctgac
cttgatgaggccatatcaaaacagatgcaggattttgcagtaatggtatttaaggctctt
cgcctaaaaacctatgcccgaatggactttttattaaatgataaaaatgaaatctactgc
ctagaagcaaatacccttcccggtatgacccctacatccttacttccccaagaggccaag
gctataggaatagattttgaagatttatgcgaattaataatagatatttccttgaaaaaa
tataataaataa
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