KEGG   Herbaspirillum seropedicae SmR1: Hsero_0097
Entry
Hsero_0097        CDS       T01268                                 
Symbol
tufB
Name
(GenBank) EF-Tu elongation factor protein
  KO
K02358  elongation factor Tu
Organism
hse  Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:hse00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:hse03012]
    Hsero_0097 (tufB)
   03029 Mitochondrial biogenesis [BR:hse03029]
    Hsero_0097 (tufB)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hse04147]
    Hsero_0097 (tufB)
Translation factors [BR:hse03012]
 Eukaryotic type
  Elongation factors
   Hsero_0097 (tufB)
 Prokaryotic type
   Hsero_0097 (tufB)
Mitochondrial biogenesis [BR:hse03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    Hsero_0097 (tufB)
Exosome [BR:hse04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Hsero_0097 (tufB)
  Exosomal proteins of breast cancer cells
   Hsero_0097 (tufB)
  Exosomal proteins of colorectal cancer cells
   Hsero_0097 (tufB)
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 RsgA_GTPase
Other DBs
NCBI-ProteinID: ADJ61624
UniProt: D8ITY3
LinkDB
Position
110426..111616
AA seq 396 aa
MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEAKAYDQIDAAPEEKARG
ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI
LLSRQVGVPYIIVFLNKADMVDDAELLELVEMEVRELLSKYEFPGDDLPIVKGSAKLALE
GDTGPLGEQAIMALAEALDTYIPTPERAVDGTFLMPVEDVFSISGRGTVVTGRVERGIIK
VGEEIEIVGIADTQKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVQRGQVLAKPGS
IKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGAIELPKDKEMVMPGDNVS
ITVQLINPIAMEEGLRFAIREGGRTVGAGVVAKIFD
NT seq 1191 nt   +upstreamnt  +downstreamnt
atggcaaaaggcaagtttgaacggaccaagccgcacgtgaacgtcggcaccatcggtcac
gttgaccacggcaagaccaccctgaccgctgcaatcgcaaccgttctgtcgaagaagttc
ggcggcgaagcgaaggcctacgaccagatcgacgcagcgcctgaagaaaaggcccgcggc
atcaccatcaacaccgcgcacgtcgaatacgaaaccgcaaaccgtcactacgcacacgtt
gactgcccaggccacgccgactatgtgaagaacatgatcaccggcgcagcgcagatggac
ggcgcgatcctggtgtgctcggccgctgacggcccgatgccccagacccgtgaacacatc
ctgctgtcccgccaggttggcgtgccttacatcatcgtcttcctgaacaaggctgacatg
gtggacgacgctgaactgctggaactggtggaaatggaagtccgtgaactgctgtcgaag
tacgagttccctggcgacgacctgcccatcgtgaagggttcggccaagctggcgctggaa
ggcgacaccggtcccctgggcgagcaagccatcatggccctggccgaagcactggacacc
tacatcccgaccccggaacgtgccgttgacggtaccttcctgatgccggtggaagacgtg
ttctcgatctccggccgtggcaccgtggtgaccggtcgcgttgagcgcggcatcatcaag
gtcggcgaagaaatcgaaatcgtcggtatcgctgacacccagaagaccacctgcaccggc
gtggaaatgttccgcaagctgctggaccaaggtcaagctggcgacaacgttggcgtgctg
ctgcgcggcaccaagcgtgaagacgtgcagcgtggccaggttctggccaagccgggttcg
atcaagccgcacaagcacttcaccggcgagatctatgttctgtcgaaggatgaaggcggc
cgtcacaccccgttcttcaacaactaccgtccgcagttctacttccgtaccaccgacgtg
accggtgcgatcgaactgccgaaggacaaggaaatggtcatgccgggcgacaacgtgtcg
atcaccgtgcaactgatcaacccgatcgctatggaagaaggtctgcgcttcgctatccgt
gaaggcggtcgtaccgtcggcgccggcgtggttgccaagatcttcgactaa

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