Herbaspirillum seropedicae SmR1: Hsero_1538
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Entry
Hsero_1538 CDS
T01268
Symbol
rcsB
Name
(GenBank) response regulator for colanic capsule biosynthesis protein
KO
K07687
two-component system, NarL family, captular synthesis response regulator RcsB
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Hsero_1538 (rcsB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
hse02022
]
Hsero_1538 (rcsB)
Two-component system [BR:
hse02022
]
NarL family
RcsC-RcsD-RcsB (capsule synthesis)
Hsero_1538 (rcsB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_38
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ADJ63053
UniProt:
D8IQ07
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Position
1773820..1774485
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AA seq
221 aa
AA seq
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MNLKKVLHVAIADDHPIVLGALRNELARLPEIRIDLEVDTGEDLINALKRTPCEIVITDF
AMPNEESDESDGFALVKRIKAEHPSTKLIVYTAMNNGAVIRRLYRMGVFAVINKREKPDE
LINACLATQSSKQLYFPVSLRGELEMSWAQGDGFAATRELTQSELEVVRLFVEGQSLGEI
CVRLSRTPSTISTHKNNAMRKLGLSSDAELIKYAFSTGMIN
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgaagaaagtcctgcacgtggccatcgcagatgaccaccctatcgtgctgggc
gcgttacgcaatgagctggctcgcttgcctgagatccgcatcgatctcgaggtcgatacc
ggcgaagacctgatcaatgcactcaagcgtacaccgtgcgagattgtcatcaccgacttc
gccatgcccaacgaggaaagcgatgagtccgatggttttgcactggtcaagcggatcaag
gccgagcatccatccaccaagctcatcgtctataccgcgatgaacaatggcgccgtgatc
cgcaggctgtaccggatgggggtgttcgccgtgatcaacaagcgcgagaagcccgacgag
ctcatcaatgcctgcctggccacgcagagcagcaagcagttgtactttcccgtttcgctg
cgaggcgaactggagatgagctgggcccagggggacggtttcgccgccacccgcgagctg
acccagagcgagctggaagtggtgcgcctgttcgtggaagggcagtcgctgggcgagatc
tgcgtacgcctctcgcgcacgcccagcaccatcagcacccacaagaacaatgccatgcgc
aagctggggctgagctccgatgccgagctgatcaagtatgccttctcgacgggcatgatc
aactga
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