KEGG   Herbaspirillum seropedicae SmR1: Hsero_1755
Entry
Hsero_1755        CDS       T01268                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase protein
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
hse  Herbaspirillum seropedicae SmR1
Pathway
hse03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hse00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Hsero_1755 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hse03019]
    Hsero_1755 (pnp)
   03016 Transfer RNA biogenesis [BR:hse03016]
    Hsero_1755 (pnp)
Enzymes [BR:hse01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     Hsero_1755 (pnp)
Messenger RNA biogenesis [BR:hse03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Hsero_1755 (pnp)
Transfer RNA biogenesis [BR:hse03016]
 Prokaryotic type
  tRNA degradation factors
   Hsero_1755 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 KH_2 S1_2 KhpA-B_KH DUF5813
Other DBs
NCBI-ProteinID: ADJ63268
UniProt: D8IRE4
LinkDB
Position
1985306..1987444
AA seq 712 aa
MFNKVTKTFQYGQHQVTLETGEIARQASGAVVVSVEDTVILATVVARKEAKPGQDFFPLT
VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV
NPEIDPDIPAMIGASAALSLAGIPFNGPVGAARVGYIDGQYVLNPTTSQLKSSQLDLVVA
GTETAVLMVESEADQLSEEVMLGAVVFGHDQSKAVIEAIHALVRDGGKPEVQWTAPAKNE
ALIARVSQLAEGPLREAYQTKDKQARTEKLKAVTAQVNEALVAEAAANNGVAADAAEVGS
ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVIAT
LGTARDEQKIDGLLGEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL
PAADEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKEGNKF
AVLTDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVALEQAKEGRHHILG
KMQEAVPAGRAELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV
TIASVDASAGQEAKRRIEELTASVEVGKIYEGTVLKLLDFGAIVQVLPGKDGLLHISQIA
NERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAAQAEEGGEAAAPQEAQ
NT seq 2139 nt   +upstreamnt  +downstreamnt
gtgttcaataaagtaaccaagaccttccagtacggtcagcatcaagtgaccctggaaacc
ggcgaaatcgctcgccaggcttctggcgccgtggtggtgtcggtggaagacaccgtcatc
ctggctaccgtggtggcccgcaaggaagccaagcccggccaggacttcttcccgctgacc
gtcgactacatcgagaagacctatgcagccggccgtatccccggtggtttcttcaagcgt
gaaggcaagccttccgaaaaggaaaccctgacctcgcgcctgatcgatcgtccgatccgc
ccgctgttcccggaaggctacctcaacgaagtgcaggtgatcatccacgtgctgtcggtg
aaccctgagatcgatcctgacatccccgccatgatcggcgcctcggccgccctgtcgctg
gccggcatccccttcaatggcccggtgggcgcagcccgcgtgggttacatcgacggccag
tacgtcctgaacccgaccacttcgcagctcaagtcctcgcaactggacctggtggtggcc
ggtaccgagaccgccgtgctgatggtggaatccgaagccgaccagctgtccgaagaagtc
atgctgggcgccgtcgtgttcggtcacgaccagtccaaggccgtcatcgaagccatccac
gccctggtgcgtgacggcggcaagccggaagtccagtggaccgccccggccaagaacgaa
gccttgatcgcccgcgtctctcaactggccgaaggcccgctgcgcgaagcctaccagacc
aaggacaagcaagcccgtaccgaaaagctcaaggccgtgaccgcccaggtcaacgaagcc
ctggtcgctgaagccgctgccaacaacggcgtggctgcggatgctgccgaagtcggttcc
atcctgttcgacctggaagccaagatcgtgcgttcgcagatcctggaaggcgaaccccgc
atcgacggccgcgacacccgcaccgtgcgtccgatctcgatccgtaccggcgtgctgccg
cgtacccacggttcggccctgttcacccgtggcgaaacgcaagccctggtcatcgcgacc
ctgggtaccgcacgcgacgaacagaagatcgatggtctgctgggtgaatactccgaccgc
ttcatgctccactacaacatgcctccgttcgccaccggcgaaaccggtcgcgtgggcacc
ccgaagcgccgcgaaatcggccacggccgcctggccaagcgcgcgctgatcgccgcgctg
ccggcggctgacgagttcagctactcggtgcgcctggtctcggaaatcaccgagtccaac
ggttcctcctcgatggcgtcggtgtgcggcggctgcctggcattgatggacgccggtgtg
ccgatgaaggcccacgtggccggcatcgccatgggcctgatcaaggaaggcaacaagttc
gccgtgctgaccgacatcctgggcgatgaagatcacctgggcgacatggacttcaaggtg
gccggtactgccaacggcattaccgccctgcagatggacatcaagatccagggcatcacc
aaggaaatcatgcaggtcgcgctggagcaggccaaggaaggccgccaccacatcctgggc
aagatgcaggaagccgtgccggccggccgtgccgagctgtccgacttcgcaccgcgcctg
atcaccatcaagatcaacccggaaaagatccgtgacgtgatcggcaagggcggcgcagtc
attcgcgccctgaccgaagaaaccggcacccagatcgacatcagcgacgaaggcgtggtc
accatcgcctccgtggatgcgtcggctggccaggaagccaagcgccgcatcgaagagctg
accgcttccgtggaagtgggcaagatctacgaaggcaccgtcctgaagctgctggacttc
ggcgccatcgtccaggtcctgccgggcaaggatggcctgctgcacatcagccagatcgcc
aacgagcgcgtcaatgccgtggccgactacctgaaggaaggccagcaagtgcgcgtcaag
gttctggaaaccgatgaccgtggccgcctgaagctgtcgatgaaggctgcccaggctgaa
gaaggcggcgaagctgctgctccgcaagaagcccagtaa

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