Herbaspirillum seropedicae SmR1: Hsero_3968
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Entry
Hsero_3968 CDS
T01268
Name
(GenBank) sugar phosphate isomerase (involved in capsule formation) protein
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00540
Lipopolysaccharide biosynthesis
hse01100
Metabolic pathways
hse01250
Biosynthesis of nucleotide sugars
Module
hse_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Hsero_3968
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hse01005
]
Hsero_3968
Enzymes [BR:
hse01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
Hsero_3968
Lipopolysaccharide biosynthesis proteins [BR:
hse01005
]
Lipid A
Hsero_3968
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
DUF2496
Motif
Other DBs
NCBI-ProteinID:
ADJ65439
UniProt:
D8ISM3
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All DBs
Position
4554244..4555272
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AA seq
342 aa
AA seq
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MSVTDDKTTPASFSAGAARRAIELARQTLQIEADAILALKNRLGDDASEPLAQAVHLLLQ
CNGRAVVSGIGKSGHIGRKIAATLASTGTPSLFMHPAEAAHGDLGMVTPNDVFIAISNSG
ETGELMAIMPIVKRMGAVIIAMTGNDNSSLARMANVHLNVGVDKEACTLNLAPTASTTAT
LAMGDALAVSLLDARGFLEEDFARSHPGGALGRRLLTHVRDVMRSGDAIPAVSPDVSLSQ
ALMEITRKGMAMTAVVDADFRPIGVFTDGDLRRLLERGQDFSQFRIAEIMHANPRTVNQD
QLAVDAVQLMEEFRINQLLVTDAQGVLTGALHIHDLTRAKVI
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaaccgatgacaaaaccacgcctgcatctttttcggccggggccgcccgccgc
gccatcgaactggcgcgccagaccctgcagatcgaagccgatgccatcctggccctgaag
aaccgccttggcgacgacgccagcgaaccgctggcccaggccgtccacctgttgctgcag
tgcaatggccgcgccgttgtctcgggcatcggcaaatccggccatatcggccgcaagatc
gccgctaccctggcctcgaccggcacgccctcgctgttcatgcatccggccgaggccgcc
catggcgacctgggcatggtcacgcccaatgatgtgttcatcgccatctccaattccggg
gaaacgggcgagctcatggccatcatgcccatcgtcaagcgcatgggcgcggtgatcatc
gccatgaccggcaatgacaattccagcctggcgcgcatggccaacgtgcatctgaacgtg
ggcgtggacaaggaagcctgtaccctcaacctggcccccaccgccagcaccacggccacg
ctggccatgggcgatgcgctggcggtctcgctgctggatgcgcgcggcttcctggaagaa
gattttgcccgctcccaccccggtggcgcgctgggccgtcgcctgctcacccatgtgcgc
gacgtcatgcgcagcggcgacgccattccggcagtgagcccggatgtctcgctgtcgcag
gcgctcatggagatcacgcgcaagggcatggccatgaccgccgtggtggatgcggacttc
cgccccatcggcgtgttcaccgatggcgacctgcgccgcctgctcgaacgcggccaggac
ttcagccagttccgcatcgccgagatcatgcacgccaatccgcgcaccgtgaaccaggac
cagctcgccgtggacgcggtgcagctgatggaagaattccgcatcaaccagctgctggtc
accgatgcccagggcgtgctgaccggcgccctgcacatccatgacctgacccgcgccaag
gtgatctga
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