Herbaspirillum seropedicae SmR1: Hsero_4218
Help
Entry
Hsero_4218 CDS
T01268
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase protein
KO
K00067
dTDP-4-dehydrorhamnose reductase [EC:
1.1.1.133
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00521
Streptomycin biosynthesis
hse00523
Polyketide sugar unit biosynthesis
hse00541
O-Antigen nucleotide sugar biosynthesis
hse01100
Metabolic pathways
hse01110
Biosynthesis of secondary metabolites
hse01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Hsero_4218 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Hsero_4218 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Hsero_4218 (rfbD)
Enzymes [BR:
hse01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
Hsero_4218 (rfbD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RmlD_sub_bind
Epimerase
GDP_Man_Dehyd
NAD_binding_4
Semialdhyde_dh
DapB_N
NAD_binding_10
Polysacc_synt_2
NmrA
NAD_binding_3
DXP_reductoisom
Ldh_1_N
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
ADJ65687
UniProt:
D8IUF5
LinkDB
All DBs
Position
4825124..4825981
Genome browser
AA seq
285 aa
AA seq
DB search
MKVLVLGASGMIGRTMFHVLSQRPGWEVCAIVRAKTFEVGAPVVTGIDLSNQDHMERLFA
QRRPDVVVNCAGLTKHLPEGNAHIPALTMNALLPHRLAQLCDIADARLIHVSTDCVFSGD
AGNYKEQDTPDATDVYGRTKALGEVTAGNALTLRTSTIGHEHGTQFGLLEWFLAQTQCKG
FRHAIFSGLPTVEFARVVRDIVIPDSSLKGLYHVGASPIDKLSLLQTIARVYKRDIAITV
DEEFRIDRSLNADKFAAATGYRAPAWPVLIEAMYEDHTSRKQSNV
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtactggttctcggcgccagcggcatgatcggccgcaccatgttccacgtccta
tcgcaacgtcccggatgggaagtctgtgcaatcgtgcgcgcaaagacatttgaggttggg
gcaccggttgtgacaggcatcgacctgagcaaccaagatcatatggaacgtctctttgcc
cagaggcgcccggatgtcgtggtgaactgcgcgggcctgacgaagcatttgcccgagggc
aatgcccacatcccagcccttaccatgaatgccctgctcccgcatcgtcttgctcaactg
tgcgacatcgccgatgcgcggctgatccacgtgagcacggactgcgtgttttcaggcgac
gctggcaactacaaggagcaggacacgcccgacgccactgacgtatatggcaggaccaaa
gcgctgggcgaagtgacagctggcaatgcgctcaccctgcgcacttccaccatcggacac
gagcatggcactcaattcggcctgctggaatggttcctggcccagacccagtgcaaggga
ttccggcatgccatcttctcaggattgccaacggtagaattcgcgcgcgtggtgagggat
atcgtcatcccggattcctcactgaaggggctatatcatgttggcgccagccccatcgat
aaactcagcctgttacagacaatcgcacgcgtttacaagagggacattgccatcacagtc
gatgaagagttccggattgaccggagcctgaatgccgacaaatttgcggcagcgactgga
tatcgggcaccagcctggccggtactgatagaggcaatgtacgaagaccacacttccagg
aagcaatccaatgtttga
DBGET
integrated database retrieval system
