KEGG   Herbaspirillum seropedicae SmR1: Hsero_4659Help
Entry
Hsero_4659        CDS       T01268                                 

Gene name
gatB
Definition
(GenBank) Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit protein
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
hse  Herbaspirillum seropedicae SmR1
Pathway
hse00970  Aminoacyl-tRNA biosynthesis
hse01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:hse00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Hsero_4659 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:hse03029]
    Hsero_4659 (gatB)
Enzymes [BR:hse01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     Hsero_4659 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     Hsero_4659 (gatB)
Mitochondrial biogenesis [BR:hse03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    Hsero_4659 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey
Motif
Other DBs
NCBI-ProteinID: ADJ66125
UniProt: D8IY03
LinkDB All DBs
Position
complement(5347548..5349008)
Genome map
AA seq 486 aa AA seqDB search
MQWEVVIGLETHTQLSTQSKIFSGSPTRFGAEPNTQASPVDLALPGVLPVLNKGAVERAI
QFGLAIGATIAPRSIFARKNYFYPDLPKGYQISQFEIPVVQGGTMSFAVEKDGKTEIKTI
NLTRAHLEEDAGKSLHEDYQGMTGIDLNRAGTPLLEIVTEPEMRSAAEAVGYAKALHSLV
MWLGICDGNMQEGSFRCDANVSVRPVGQEKFGTRCEIKNLNSFRFLEEAINYEVRRQIEL
IEDGGTVVQETRLYDPDKKETRSMRSKEDAQDYRYFPDPDLPPLAISQEWIERVKATMPE
LPAAMRERFVAEYALPEYDAMVLTQSKGMASYFEAVVAAAGKEQAKPAANWLMGDVASTL
NREDTDIADAPVKAAQLALLLKRIADGTISNKIAKEVFAGMWEARSDKDSLADDIIEAKG
LKQISDSGALEAIVDQVLAANEKSVAEFRAGKEQAINALIGQAMKATRGKANPAQLTELL
RKKLSS
NT seq 1461 nt NT seq  +upstreamnt  +downstreamnt
atgcagtgggaagtcgtcatcggcctcgaaacgcacacgcagctttcgacccaatccaag
atcttcagcggcagcccgacccgcttcggcgccgaacccaacacccaggccagcccggtg
gacctggccttgccgggcgtgctgccggtcctcaacaagggcgctgtggaacgcgccatc
cagttcggcctggccatcggcgccaccatcgcgccgcgctcgatctttgcgcgcaagaac
tacttctatcctgacctgcccaagggctaccagatcagccagttcgagattccggtcgtg
caaggaggcaccatgtccttcgccgtcgagaaggatggcaagaccgagatcaagaccatc
aacctgacccgcgcccacctcgaagaagacgctggcaagtcgctgcacgaagactaccag
ggcatgaccggcatcgacctcaaccgcgccggcacgccgctgctggaaatcgtcaccgaa
cccgagatgcgcagcgccgccgaagccgtcggctacgccaaggccttgcactcgctggtg
atgtggctgggcatctgcgacggcaacatgcaggaaggctccttccgctgcgacgccaac
gtttccgtgcgtccggtcggccaggaaaaattcggcacccgttgcgagatcaagaacctg
aactccttccgcttcctcgaagaagccatcaactacgaagtgcgccgccagatcgaactg
atcgaagacggcggcaccgtcgtgcaggagacccgcctctacgatccggacaagaaggaa
acccgctccatgcgcagcaaggaagacgcgcaggactaccgttacttccccgaccccgac
ctgccgccgctggccatctcgcaggagtggatcgagcgcgtcaaggccaccatgcccgag
ttgcccgccgccatgcgcgagcgcttcgtggccgagtatgcgctgccggaatacgacgcc
atggtgctcacgcaatccaagggcatggcgtcctacttcgaagccgtggtcgcggcagcc
ggcaaggaacaagccaagccggccgccaactggctgatgggtgacgtcgcctccacgctc
aatcgcgaagacaccgacatcgctgacgcccccgtgaaggccgcgcaactggccctgctg
ttgaagcgcatcgccgatggcaccatctccaacaagatcgccaaggaagtcttcgccggc
atgtgggaagccaggtccgacaaggattccctggccgatgacatcatcgaagccaagggc
ttgaagcagatctccgacagcggcgcgctggaagccatcgtggaccaggtgctggccgcc
aatgaaaagtcggtcgccgaattccgcgccggcaaggagcaagccatcaacgccctgatc
ggccaggccatgaaggctacccgcggcaaggccaaccccgcgcaactgaccgaattgctg
cgcaagaagctgagcagctga

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