Vreelandella sulfidaeris: HSBAA_14240
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Entry
HSBAA_14240 CDS
T06264
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hsr
Vreelandella sulfidaeris
Pathway
hsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HSBAA_14240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsr03019
]
HSBAA_14240
03009 Ribosome biogenesis [BR:
hsr03009
]
HSBAA_14240
Enzymes [BR:
hsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HSBAA_14240
Messenger RNA biogenesis [BR:
hsr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HSBAA_14240
Ribosome biogenesis [BR:
hsr03009
]
Prokaryotic type
rRNA helicases
HSBAA_14240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
BBI60118
UniProt:
A0A455U787
LinkDB
All DBs
Position
886176..886937
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AA seq
253 aa
AA seq
DB search
MLDEADEMLRMGFIDDVKRVVADTPKDAQRVFFSATLPAEIERIVNRYLVNPVKVAIESS
TTTGENIEQRIVRVDGGAKLEALSRILEVEPVDGAIVFVRTRAACTTLVEQLTARGVNAA
GLSGDLDQSLRERTITRLKRGKVDVLIATDVAARGLDVSRITHVINYDLPQDAEAYTHRI
GRTGRAGRSGIAITFAGFREGRKVGWMEQATGQKMTEMALPDEAAIRAHRDEVFHQRVTA
SLTKGCRRATRAD
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgaagccgacgaaatgctgcgcatgggctttatcgacgacgtaaaacgcgtg
gttgccgataccccgaaagatgctcagcgcgtgttcttctcggccacgttgccggctgaa
attgaacgcattgttaaccgctacttggttaaccctgtgaaagtcgccattgaatctagt
accacgaccggcgaaaacattgagcagcgcattgttcgtgttgatggcggtgctaagctc
gaagccctatcccgtattcttgaagttgaaccggtcgatggtgccatcgtctttgtacgt
acacgtgcggcctgtaccacgctagttgagcagttgactgcccgtggtgttaacgctgct
ggcctgtcgggtgatctcgaccaaagcttgcgtgagcgtaccattacgcgcttgaagcgt
ggcaaagtcgacgtgctgatcgccacggatgtggcagctcgtggtcttgacgtgtcgcgt
atcacccacgtcattaattacgacctgccccaagatgcggaagcctacacgcaccgtatc
ggccgtactggtcgtgctggtcgcagtggtattgccatcacctttgctggcttccgtgaa
ggccgcaaagtcggctggatggagcaggcaaccggtcagaagatgaccgaaatggcgctg
cctgacgaagccgctattcgtgcccatcgtgatgaagtctttcatcagcgtgtcactgcc
tccttaaccaaggggtgcagaagagcaacgcgcgctgattga
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