Hymenobacter swuensis: Hsw_3137
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Entry
Hsw_3137 CDS
T03055
Name
(GenBank) hypothetical protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hsw
Hymenobacter swuensis
Brite
KEGG Orthology (KO) [BR:
hsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsw03016
]
Hsw_3137
Enzymes [BR:
hsw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Hsw_3137
Transfer RNA biogenesis [BR:
hsw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Hsw_3137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AHJ98732
UniProt:
W8F3Y1
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All DBs
Position
3564686..3565933
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AA seq
415 aa
AA seq
DB search
MLTPYLYSNLPGSFRHFTFRPVLLMPDIQYITEAAAVAQAAEALQQKPRVGIDLEFDDMR
HRYGRNLALIQIFDGEIVYLIDPLPLTNPAHDLEPLWAILRDPAVEKVFHSCKSDILLLD
ELYDVHVRNIIDTSVQYTLLAEADNNISLGRLIQQELGLEVDKGEQKSNWLKRPLTEGQK
HYAANDVLYLFELTDRLQAKLAALGRTTWSEQENQALEEVRYSRDERPYLRLAGKYRIQP
QELPMFRDLFLLRDEVARHIDRPSYMVASNDRLAELTRLPVTSSGHLRNAPGLHPELKRS
PFAERLVELANEDRPAEPVLPAEQRRFPFRRRLTGAKAAQADAREALLLALKNHLAEDQS
PIMANLVLSNRLIADIIEQGADQTLRPWQHALLQETAQKHELDFQQIARPFDLQG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
ttgctcactccctacctttactccaacctgccgggcagtttccggcacttcacattccga
cctgtactattaatgcctgatatccagtatatcaccgaagccgccgcggttgcccaggca
gctgaggccctgcagcaaaagccccgcgtgggcatcgacctggagtttgacgacatgcgc
caccgctacggccgcaacctcgctctgattcagatttttgacggcgaaatcgtttacctg
attgatccgctgcccctcaccaacccggcgcacgacctagagccgctgtgggctattctg
cgtgacccggccgtggaaaaggtcttccatagctgcaaatccgatattctactcctcgat
gagctgtacgatgtgcatgtgcgcaacatcatcgacacgagcgtacagtacacgctgctg
gccgaagccgataacaacatttccctgggccgcctgattcagcaggagctgggcttggag
gtggacaaaggcgagcagaaatcgaactggctgaaacggccccttacggaaggccagaag
cactatgccgccaacgacgtgctgtacctgttcgagttgacggaccggctgcaggccaaa
ctggccgcgctgggccgcacgacgtggtcggagcaggaaaaccaggcgctggaggaagtg
cgctacagccgcgacgagcggccttatctgcgtctggcaggcaagtaccggattcagccc
caggagctgcctatgttccgcgacctgtttctgctgcgcgacgaggtagctcgccacatt
gaccggccctcatacatggtagctagcaacgaccggctggctgaactgacccggctgccc
gtaaccagctccggccacttacgcaacgcccccggcctgcaccccgagcttaagcgcagc
ccctttgccgagcggctggtagagctggccaacgaagaccgccccgccgagccagtcctc
ccggccgagcagcgccgcttcccgttccgccgtcggcttaccggggccaaagccgcccag
gccgatgcccgcgaggctctgctactggccctgaaaaaccacctggccgaagaccaaagc
cctattatggcgaatctggtcctcagcaaccgcctcattgccgatataattgagcagggg
gccgaccaaacgctgcggccctggcagcatgccttgctgcaggaaacggcccaaaagcac
gagctggactttcagcagattgcccgccccttcgacctgcaggggtaa
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