Haloterrigena turkmenica: Htur_2570
Help
Entry
Htur_2570 CDS
T01154
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
htu
Haloterrigena turkmenica
Brite
KEGG Orthology (KO) [BR:
htu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htu03019
]
Htur_2570
03009 Ribosome biogenesis [BR:
htu03009
]
Htur_2570
04131 Membrane trafficking [BR:
htu04131
]
Htur_2570
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
htu04147
]
Htur_2570
Messenger RNA biogenesis [BR:
htu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Htur_2570
Ribosome biogenesis [BR:
htu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Htur_2570
Membrane trafficking [BR:
htu04131
]
SNARE
SNARE associated proteins
Others
Htur_2570
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Htur_2570
Exosome [BR:
htu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Htur_2570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_5
TIP49
AAA_33
AAA_22
AAA_14
RNA_helicase
nSTAND3
AAA_28
AAA_7
DUF815
Mg_chelatase
AAA_25
IstB_IS21
AAA_3
AAA_18
NB-ARC
ABC_tran
AAA_17
NACHT
TsaE
AAA_11
AAA_24
Zeta_toxin
AAA_30
Parvo_NS1
ATPase
Sigma54_activat
PhoH
SLFN-g3_helicase
bpMoxR
AAA_19
Bac_DnaA
Vps4_C
ATP-synt_ab
Zot
HJURP_C
Motif
Other DBs
NCBI-ProteinID:
ADB61447
UniProt:
D2RW18
LinkDB
All DBs
Position
complement(2640956..2643220)
Genome browser
AA seq
754 aa
AA seq
DB search
MKLTVKPLKQKDAGRGLAAIDRVSMRELDLENGDYIVIEGTGDSQAVARVWPGYPEDEGR
GIIRIDGRLRQEADVGIDDNVSVEPADVNPAKSVTVALPQNLRIRGDIGPLVRDKLSGQA
VTEGQTVPFSLSFGPMASSGQSVPLKIASTSPSGTVVITDSTNIEISETPAEQVSSGSGA
SAEGVPNVTYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTL
MAKAVANEIDAHFETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKR
EDAGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRVDDIDPALRRGGRFDREIEIGVPD
KDGRKEILQVHTRGMPLQESIDLDQYAENTHGFVGADLESLVREGAMNALRRIRPDLDLE
EDEIDAEILETLEVTEDDFKDAIKGIQPSAMREVFVEIPDVTWDDVGGLEDTKERLRENV
QWPLDYPEVFDELDMQAAKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVG
ESEKGVREVFEKARSNAPTVIFFDEIDSIAGQRGRQQSDSGVGERVVSQLLTELDGLEEL
EDVVVIATTNRPDLIDNALLRPGRLDRHVHVPVPDEEGRRKIFEVHTRGKPLADSVDLDW
LAAETEGYVGADIEAVTREASMAASREFINSVDPEEMADTIGNVRISKEHFEHALEEVNP
SVTPETREQYEEIEEQFDTAEPAQEEDQLGRTFQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaccgttaaaccactgaaacagaaggacgccggccgcggactcgccgcgatc
gatcgcgtctcgatgcgcgaactcgatctcgagaacggcgactacatcgtaatcgagggc
acgggcgacagccaggccgtcgcgcgcgtctggcccggataccccgaagacgaggggcga
gggatcatccgaatcgacggccgcctccgccaggaggccgacgtcgggatcgacgacaac
gtcagcgtcgagcccgccgacgtcaaccccgccaagtcggtcacggtcgcgctgccccag
aacctccgcattcgcggagacatcgggccgctcgtccgcgataagctgagcggacaggcc
gtcaccgagggccagacggtgccgttctcgctctcgttcggtccgatggccagctccggc
cagtcggtgccgctgaagatcgcgagcacctcgccgtcgggcacggtcgtcatcacggac
tcgacgaacatcgagatctccgagacgcccgccgagcaggtcagctcgggtagcggcgcc
tccgccgagggcgtcccgaacgtcacctacgaggacattggcggcttagacgacgaactc
gaccaggtccgcgagatgatcgagctgccgatgcgccaccccgagctgttccagcagctc
ggcatcgagccgccgaagggcgtcttgctgcacggcccgccgggcaccgggaagaccctg
atggccaaggccgtcgccaacgagatcgacgcccacttcgagacgatctccggtccggag
atcatgtcgaagtactacggtgagagcgaggagcaactccgcgaggtcttcgaagaggcc
gaggagaacgcccccgcgatcatcttcatcgacgagctcgactcgatcgccgccaagcgc
gaagacgccggcggcgacgtcgaacgacgcgtggtcgcccagctcctcagcctgatggac
ggcctcgaggaacgcggtcgcgtcaccgtcatcgcggcgaccaaccgcgtcgacgacatc
gatcccgcgctccgccgcggcggtcgcttcgaccgcgagatcgagatcggcgtcccggac
aaggacggccgcaaggagatcctgcaggtccacacccgcgggatgccgctccaggagtcg
atcgacctcgaccagtacgccgagaacacccacggcttcgtcggggccgacttagagagc
ctcgtccgcgagggcgcgatgaacgccctgcgtcgcatccgtcccgacctcgacctcgag
gaggacgagatcgacgccgagatcctcgagaccctcgaggtcaccgaggacgacttcaag
gacgcgatcaagggcatccagccctcggcgatgcgggaggtcttcgtcgagatccccgac
gtcacctgggacgacgtcggcggcctcgaagacaccaaggagcgcctccgcgagaacgtc
cagtggccgctggactaccccgaggtgttcgacgaactcgacatgcaggccgccaagggc
gtcctcatgtacggcccgccgggtacggggaagaccctgctcgcgaaggccgtcgccaac
gaggcccagtcgaacttcatctcgatcaagggccccgaactgctgaacaagtacgtcggg
gagtccgagaagggcgtccgtgaggtcttcgagaaggcgcggtcgaacgcaccgaccgtg
atcttcttcgacgagatcgactcgatcgcgggccagcgcggccgccagcagagcgactcc
ggcgtcggcgaacgcgtcgtcagccagctgctgaccgaactcgacggcctcgaggaactc
gaggacgtcgtcgtgatcgccacgaccaaccggccggacctgatcgacaacgccctgctc
cgtcccggacggctggatcgccacgtccacgtgcccgtccccgacgaggagggtcgtcgg
aagatcttcgaggtccacacccggggcaagcccctggccgactcggtcgacctcgactgg
ctcgccgcggagacggagggctacgtcggcgccgacatcgaagccgtcacgcgcgaggcc
tcgatggccgccagccgcgagttcatcaactcggtcgaccccgaggagatggccgacacc
atcggcaacgtccgcatcagcaaggagcacttcgagcacgccctcgaggaggtcaacccg
agcgtgacccccgagacccgcgagcagtacgaggagatcgaagagcagttcgacaccgcc
gaaccggctcaggaagaggaccagctcggtcgcaccttccagtaa
DBGET
integrated database retrieval system
