Humibacter ginsenosidimutans: FPZ11_12925
Help
Entry
FPZ11_12925 CDS
T06119
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
huw
Humibacter ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
huw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
huw03032
]
FPZ11_12925 (gyrA)
03400 DNA repair and recombination proteins [BR:
huw03400
]
FPZ11_12925 (gyrA)
Enzymes [BR:
huw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FPZ11_12925 (gyrA)
DNA replication proteins [BR:
huw03032
]
Prokaryotic type
DNA Topoisomerases
FPZ11_12925 (gyrA)
DNA repair and recombination proteins [BR:
huw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FPZ11_12925 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Nnf1
Motif
Other DBs
NCBI-ProteinID:
QDZ15546
UniProt:
A0A5B8M5G7
LinkDB
All DBs
Position
2800308..2802932
Genome browser
AA seq
874 aa
AA seq
DB search
MADETDGIEQTAPQPGDAGDGIVHGKIEPVELQLEMQRSYLDYAMAVIVGRALPEVRDGL
KPVHRRVIYAMYDGGYRPDRAFSKCSRVVGDVMGQFHPHGDTAIYDTLVRLVQPWSLRYP
LALGQGNFGSPGNDGAAAMRYTETKMAPLALEMVRDIDEDTVDFTDNYDGRTQEPTILPS
RFPNLLVNGSVGIAVGMATNIPPHNMREVAAGALWALEHPDATREELLDALMERIKGPDF
PTGAQILGVKGIHDAYRTGRGSITMRSVVNVEEIHGRTCLVVTELPYQVNPDNLAIKIAE
FVKDGRIGGIADIRDESSGRTGQRLVIVLKRDAVAKVVLNNLYKHTQLQENFGANMLAIV
DGVPRTLPLDGFVTAWVDHQIDVIVRRTRFRLRKAEEDAHIQRGLVKALDALDEVIALIR
RSPSADEARAGLMDLLDVDQVQADAILSMQLRRLAALERQKIIDNLARLEAEIADYKAIL
ADEARQRSIVSEELTEIADKFGDERRTNILYGFDGDMSVEDLIPEEEMVVTVTRGGYIKR
TRSDNYRSQHRGGKGVKGAQLRGEDVVEHFFVTTTHHWLLFFTTKGRVYRAKGYEVPEAG
RDAKGQHVANLLAMQPDEEIAEILDIRDYSVAKYLVLATRDGLLKKTELAEYDTNRTGGI
IAIKLREDDELISALLVEEDSDIFLVSRKGMSLRFTATDDALRPMGRSTSGVIGMHFRDD
DSLLEASVIAAPGVEAGDSAASADEGYVFVVTEGGYAKRTAVDQYRRQGRGGLGIKVAKL
SDDRGDLAGALIVADDDEVLVVLASGKVVRSAVAEVPAKGRDTMGVVFARFADDDKIIAI
ARNSERNLDAHDAEPADEEAGKEAAEPGKDTIDE
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgagaccgacggcatcgagcagactgcaccgcagcccggcgacgccggtgac
ggcatcgtgcacggcaagatcgagccggtcgagctgcagctggagatgcagcgcagctac
ctcgactacgcgatggccgtcatcgtcgggcgagcgcttcccgaggtgcgcgacggactc
aagccggtgcatcgccgcgtcatctacgccatgtacgacggcggataccggcccgaccgc
gctttctcgaagtgctcccgcgtcgtcggcgacgtgatgggccagttccacccgcacggt
gacacggctatctacgacacgctcgtgcgccttgttcagccgtggagtctgcggtatccg
ctggcgctcggtcagggcaacttcggatcaccgggcaacgacggcgcggccgccatgcgg
tacaccgagaccaagatggcgccgctggcgctcgagatggtgcgggacatcgacgaggac
accgtcgatttcaccgacaactacgacgggcgcacgcaggaaccgaccattctgccgagc
cgcttccccaacctgctcgtcaacgggtcggtgggcatcgcggtcggcatggccacgaat
atcccgccgcacaacatgcgagaggtcgctgccggcgcactctgggcgctcgaacatccg
gatgccacgcgcgaagagctgctcgacgcgctcatggaacgcatcaagggtccggacttc
ccgaccggcgcgcagattctcggcgtgaagggcattcacgacgcctaccgcacgggccga
ggctcgatcacgatgcgctccgtggtgaacgtggaggagattcacggtcgcacctgcctg
gtggtcaccgagctgccgtatcaggtgaaccccgacaacctcgcgatcaagatcgcggag
ttcgtcaaggacggtcgcatcggcggcatcgccgacatccgcgacgagtccagcggtcgc
accggtcagcgcctcgtcatcgtgctcaagcgcgacgccgtggccaaggtcgtgctgaac
aacctgtacaagcacacgcaactgcaggagaacttcggcgccaacatgctcgcgatcgtc
gacggcgtgccgcgcacgcttccgctcgacggtttcgtcacggcgtgggtcgatcaccag
atcgacgtgatcgtgcgccgcaccaggttccggctgcgcaaggcggaagaggatgcccac
atccagcggggtctcgtcaaggcgctcgacgcgctcgacgaggtcatcgcactcatcagg
cgctcgccgagcgccgacgaggcacgtgcgggcctgatggacctgctcgacgtggaccag
gtgcaggcggacgccatcctgtccatgcagctgcgccggctcgcggccctcgagcgtcag
aagatcatcgacaacctcgcccggctcgaggcggagatcgccgactacaaggcgatcctg
gccgatgaggcgcgccagcgttcgatcgtgtcggaagagctcaccgagatcgccgacaag
ttcggggacgagcggcgcacgaacatcctctacggattcgacggcgacatgagtgtcgaa
gacctcattcccgaagaagagatggtcgtgacggtcacgcgcggcggttacatcaagcgc
acccgaagcgacaactatcgttcccagcacagaggcggcaagggcgtgaagggcgcccag
ctgcgcggcgaagacgtcgtcgagcacttcttcgtcacgacgacccaccactggctcctc
ttcttcacgaccaaggggcgggtctaccgtgcgaagggctacgaggtgccggaagccggg
cgggatgccaagggtcaacacgtcgccaatctgctggccatgcagcccgacgaggagatc
gcagagatcctcgacatccgcgactattcggtcgcgaagtacctggtgctcgccacacgc
gacggtctgctcaagaagacggagctggccgaatacgacaccaatcgcaccggcggcatc
atcgcgatcaagctgagagaagacgacgaattgatctcggccctgctggtcgaagaagac
tcggacatcttcctcgtctcccgcaagggcatgtcgttgcggttcactgcgaccgatgac
gcgctgcggccgatgggtcgctcgacgtcgggtgtcatcggcatgcacttccgtgacgac
gactctcttctggaggcttcggtcatcgccgctccgggcgttgaagccggtgattccgcg
gcttctgccgacgaaggttacgtcttcgtcgtgactgagggcgggtatgcgaaacgcacc
gcggtcgaccagtatcgccgccaggggcgtggtggactgggcatcaaggtggccaagctg
agcgacgatcgaggcgatctcgcgggtgcgttgatcgtcgcggatgacgacgaggtgctc
gtggttcttgccagcggcaaggtggtacgctctgccgtggctgaggtgccggcgaagggc
cgtgacaccatgggtgtcgtgttcgcacgctttgccgatgatgacaagatcattgccatc
gcacgcaacagcgagcgcaatctggacgctcacgacgccgaaccggccgatgaagaggcc
ggcaaggaggccgcggagcccggaaaggacacgatagatgagtag
DBGET
integrated database retrieval system
