Humibacter ginsenosidimutans: FPZ11_15230
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Entry
FPZ11_15230 CDS
T06119
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
huw
Humibacter ginsenosidimutans
Pathway
huw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
huw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FPZ11_15230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
huw03400
]
FPZ11_15230
DNA repair and recombination proteins [BR:
huw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
FPZ11_15230
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QDZ15943
UniProt:
A0A5B8M6E6
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Position
3289021..3290751
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AA seq
576 aa
AA seq
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MVAVMRLLGHTGWWNTAMKLAATAERTADGFSPHRPTSERMRGAEVMFESILFPGSNRVS
APFATKEPECFRDLGLDQIVETLTASREEYELPPIYWTAVRDSEVIEYRQGVYTDLAHPA
VHHAAAEFAEGMRLHRARFVQASRLFAREQRPFWVLSAIVTHQGAVRDFARALKDVPLRS
AGMLALRDWLDALVTGQAFTEAVERAADIRSRLDEIHFTVRIDGLRVEVAPFADQPDYSA
EVEATFARFKQGEVKDHRVRYTDYVDADRVEEGVLRLVGEENQHVFAALDQYVREYACSE
PAAYLDPTVARVDRELQFYLSYLEHLAPMVEDGLEFCMPRVSASKAVSAQHTFDLALAEK
LDRHRASMVTNDFELREPERLIVVTGANQGGKTTFSRTFGQLHWLAELGLPVPGSSASLF
LFDALFTHYEKQEDISNLRGKLEDELVRIRKILEAATSDSVVIMNEIFNSTTLDDSILLG
TAVLKQIIERDILAVCVTFVDELTTLSDTTVSMVAAVDPAEPTKRTFKLERRPADGLAYA
LALADKYRLRNAQVRQSIEGTQSESRVLLDPVEKGA
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggtaatgcggcttctcgggcacactggttggtggaacacggcgatgaagctc
gccgcaaccgcggaacgaaccgctgatggcttctccccgcaccgaccgacctcggagcgg
atgagaggagcagaagtgatgttcgagagcatcctgtttcccggctcgaaccgggtcagc
gcaccgttcgcgacgaaggaaccggagtgtttccgcgacctcggcctcgaccagatcgtc
gagacgctgacggcttcgcgcgaggaatacgagttgccgcccatctactggacggccgtc
cgcgacagcgaggtgatcgagtaccggcaaggtgtgtacacggacctcgcgcatccggcg
gtgcatcatgcggcagcggaattcgcagagggcatgcggctgcaccgagcacgtttcgtc
caggcgtccaggctcttcgcgcgggagcagcgcccgttctgggtgctttcggccatcgtc
acgcaccagggcgccgtccgcgatttcgcccgggcgctgaaggatgtcccgctgcggtcc
gccgggatgctcgccttgcgcgactggctcgatgcactcgtcacagggcaggcgttcacg
gaggcggtcgaacgcgccgcagatatccgatcgcgcctcgatgagatccacttcacggtt
cggatcgacggactgcgagtggaggtggcgccgttcgccgatcagccggactacagcgct
gaggtggaggcgacgttcgcccggttcaagcagggcgaggtgaaggatcaccgggtgcgg
tacaccgattacgtcgacgcggaccgcgtggaggagggcgtgctgcggctggtgggggag
gagaaccagcacgtcttcgcggcactcgatcagtatgtgcgggagtacgcctgctccgag
cctgccgcctacctggacccgacggtcgcacgggtcgaccgggagttgcagttctatctc
tcgtatctcgagcacctcgcaccgatggtggaggacggcctggagttctgcatgccccgg
gtgtcggcctccaaagcggtctccgcgcagcacacgttcgacctcgccctggccgagaag
ctcgacaggcaccgggcgtccatggtgacgaacgatttcgaactgcgcgaacccgaacgg
ctgatcgtggtgacgggtgcgaaccagggcggaaagacgacgttctcgcgcacgttcggc
caactgcactggctggccgaactcgggctgccggtgcccggttcctcagcgtcgctgttc
ctgttcgacgcgctgttcacgcactacgagaagcaggaggacatcagcaatctgcgcggc
aagctcgaggacgagctggttcgcatccggaagatcctcgaggcggcgacgagcgacagc
gtcgtcatcatgaacgagatcttcaactcgaccacgctcgacgactcgatcctgctcggt
actgcggtgctgaagcagatcatcgaacgggacatcctcgccgtctgtgtcaccttcgtc
gacgagctcacgaccctcagcgacacgaccgtgagcatggtcgccgcggtcgatcctgct
gagccgaccaagcgcacattcaaactcgaacggcgcccggcggacgggctggcctacgcc
ctcgctctcgccgacaagtaccggctccggaacgcgcaggtcaggcagtcgatcgaggga
acccaatcggagtcgcgggttttactcgacccggtcgagaagggagcatga
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