Vreelandella venusta: EI420_12760
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Entry
EI420_12760 CDS
T05892
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hvn
Vreelandella venusta
Pathway
hvn03420
Nucleotide excision repair
hvn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EI420_12760
03430 Mismatch repair
EI420_12760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvn03400
]
EI420_12760
Enzymes [BR:
hvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EI420_12760
DNA repair and recombination proteins [BR:
hvn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EI420_12760
MMR (mismatch excision repair)
Other MMR factors
EI420_12760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
Viral_helicase1
DEAD
PhoH
SLFN-g3_helicase
nSTAND3
AAA_16
FtsK_SpoIIIE
AAA_11
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AZM96499
UniProt:
A0A3S8YTW0
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All DBs
Position
complement(2676449..2678251)
Genome browser
AA seq
600 aa
AA seq
DB search
MKLLRLKLMKLRLKLMTMKLSKMDIYADKDRFLDEPGHALVLGGPGSGKTTIALKKAIVR
VEQGLSPGQSVLFLSFSRAAVARVIEAATEWVPQECMNRISIQTFHSFFWSIIKTHGYLI
GSPRKLSILLPHDERAINKGIKSDNAEWVQWMEERERLFYEEGRVAFDLFSSKALKLLSE
SSRINNLVTSKHPLIIIDEAQDTDEKQWASARMLATQSQLVCLADLEQQIYDFREGISAE
RITDILDQLNPLRIDLGGENNRSPDSEILQCGNDILSSSPKVSGYNGVSRQLYNPKKATR
DLAIRSSVGRVIKNIANETAGKPENIAILTSTNRGVTIVVNALRGDGDQKPIPHKILFDQ
TKALLSSRLIAFLLEPKDKNNVLENKAVFLELLRDVFQSKGTKTSQDKADRWNDYIEILN
EGRDCRRTAFTKTVDKVLSDLGSHQFEGNPRKDWLYVRHLLRKEGNADLKEVESSVEYLM
AFNRGKAISSGLAKNWQEKGNYSSARRVITMALTQDQLMSDDNDSSGLHVMTMHKSKGKQ
FDGVILFHEGNICSFTTYGDKAPYQKSRKLLRVAVTRARKHVFFLTDVFNPPEILEGFNF
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctgaggctcaagctgatgaagctgaggctcaagctgatgacgatgaagttg
agtaaaatggatatttacgcagataaggacagatttcttgatgagccaggtcatgccttg
gttttaggagggcctggatcgggaaagactacaatagctttaaaaaaagctattgttcgt
gtagagcaaggtttaagccctggacaatcagtactttttttaagtttctctagagcagcc
gttgctagagttatagaggctgcaacagaatgggtgccccaagaatgtatgaatcgaatt
tcaattcaaacattccattcttttttttggtctattattaaaactcatggttatttgata
ggtagcccacggaagttatctatcctactgcctcatgacgaaagagcaattaataaagga
ataaaatctgataatgctgagtgggtacagtggatggaggaaagagagcgcctattttat
gaagaagggcgtgttgcattcgatttgttctcttcgaaagcattaaagttgctttctgaa
tcatctagaataaataatttagtaacatcaaagcaccctttgataattattgatgaagct
caagatactgatgaaaagcaatgggccagcgctagaatgttggctacacagagtcagctt
gtttgcctagccgacctagaacagcaaatatatgatttccgtgaaggaattagtgctgaa
agaattactgatattttagatcaattaaaccctttgcgaattgatctgggaggggagaat
aacagaagccctgattctgaaatactacagtgcggtaatgatatactctcatcttcacca
aaagtcagtggttataatggtgtatcaagacagttatataaccctaaaaaggccactcgt
gatttagcaatcagatcttctgttggaagggtcattaaaaacattgcaaatgagacagct
ggtaaaccagagaatattgcaattctaacatccactaatcgaggtgttaccattgtagtt
aatgctttacgtggagatggagaccaaaagccgataccgcataagattttgtttgatcaa
actaaagcattgctgtcaagtaggcttattgcttttttattggagccaaaagataaaaat
aatgtgctagaaaataaggcggtttttttagagcttttaagggatgttttccaatctaag
ggcaccaaaacatcacaagataaagcagatcgatggaatgattatattgaaatcttgaat
gaaggacgtgattgtaggaggactgcatttactaagactgtagacaaagtcttatcagac
ttgggaagccatcaattcgagggtaacccaagaaaagattggttgtatgtaagacatttg
cttcgaaaagaaggaaatgcagatttaaaagaagttgaatcttctgttgagtacttaatg
gcttttaatcgaggaaaggcaatttcttcaggtttggccaagaactggcaggaaaaagga
aactattcatcggcgcgtagagttattaccatggcattaacccaagatcaactaatgtcg
gatgataacgatagctcgggcttgcatgttatgactatgcacaagtctaagggaaagcaa
tttgatggagtgatcttgtttcacgagggcaatatttgttcttttaccacttatggagac
aaagctccttatcaaaaaagccgcaagctgcttcgagttgctgttactagggctcgaaag
catgttttctttctaactgacgtctttaatccacctgaaatccttgaaggatttaatttt
tga
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