KEGG   Haloquadratum walsbyi C23: Hqrw_3936
Entry
Hqrw_3936         CDS       T01942                                 
Symbol
tbpB
Name
(GenBank) TATA-binding transcription initiation factor
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
hwc  Haloquadratum walsbyi C23
Pathway
hwc03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hwc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Hqrw_3936 (tbpB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hwc03000]
    Hqrw_3936 (tbpB)
   03021 Transcription machinery [BR:hwc03021]
    Hqrw_3936 (tbpB)
Transcription factors [BR:hwc03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    Hqrw_3936 (tbpB)
Transcription machinery [BR:hwc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     Hqrw_3936 (tbpB)
  RNA polymerase III system
    TFIIIB
     Hqrw_3936 (tbpB)
  RNA polymerase I system
    SL1/TIF-1B
     Hqrw_3936 (tbpB)
SSDB
Motif
Pfam: TBP T4bSS_IcmS DUF3378
Other DBs
NCBI-ProteinID: CCC41669
UniProt: G0LFA6
LinkDB
Position
2929568..2930128
AA seq 186 aa
MTDPKDTINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQKPKSAALIFR
SGKIVCTGAKSTTDVRESLHIVFDKLRDLRIPVSDNPDITVQNIVTSADLGEDLNLNAIA
IGLGLENIEYEPEQFPGLVYRLDNPAVVALLFGSGKLVITGGKEPDDAREAVDVILSRLD
ELGLAG
NT seq 561 nt   +upstreamnt  +downstreamnt
atgactgatccgaaggatacaatcaatattgaaaatgttgttgcctcgacgggaatcggg
caagaacttgatcttcagagtgtggcaatggatcttgagggggcagattatgacccagaa
cagtttccaggattagtctatcgaacacaaaagccgaagtctgctgctcttatttttcga
tctgggaagattgtctgcaccggggcaaagtcaactactgacgtccgtgaaagtctccat
attgtgtttgacaaacttcgtgacctccggattcctgtctccgacaatccagacatcacc
gtacaaaacattgtgacatctgcagatcttggagaagatttgaatcttaatgcaatcgct
attggacttggattagagaatattgaatatgagccagaacagtttcccgggcttgtatac
cgacttgataacccagctgttgtggcattattattcggatcgggaaaactcgtgattacg
ggtggaaaagagcctgatgatgcacgtgaggctgttgatgttattctctcccgattggac
gaactcggtttagctggttaa

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