Haloquadratum walsbyi C23: Hqrw_3936
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Entry
Hqrw_3936 CDS
T01942
Symbol
tbpB
Name
(GenBank) TATA-binding transcription initiation factor
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hwc
Haloquadratum walsbyi C23
Pathway
hwc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hwc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hqrw_3936 (tbpB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hwc03000
]
Hqrw_3936 (tbpB)
03021 Transcription machinery [BR:
hwc03021
]
Hqrw_3936 (tbpB)
Transcription factors [BR:
hwc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
Hqrw_3936 (tbpB)
Transcription machinery [BR:
hwc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Hqrw_3936 (tbpB)
RNA polymerase III system
TFIIIB
Hqrw_3936 (tbpB)
RNA polymerase I system
SL1/TIF-1B
Hqrw_3936 (tbpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
T4bSS_IcmS
DUF3378
Motif
Other DBs
NCBI-ProteinID:
CCC41669
UniProt:
G0LFA6
LinkDB
All DBs
Position
2929568..2930128
Genome browser
AA seq
186 aa
AA seq
DB search
MTDPKDTINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQKPKSAALIFR
SGKIVCTGAKSTTDVRESLHIVFDKLRDLRIPVSDNPDITVQNIVTSADLGEDLNLNAIA
IGLGLENIEYEPEQFPGLVYRLDNPAVVALLFGSGKLVITGGKEPDDAREAVDVILSRLD
ELGLAG
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgactgatccgaaggatacaatcaatattgaaaatgttgttgcctcgacgggaatcggg
caagaacttgatcttcagagtgtggcaatggatcttgagggggcagattatgacccagaa
cagtttccaggattagtctatcgaacacaaaagccgaagtctgctgctcttatttttcga
tctgggaagattgtctgcaccggggcaaagtcaactactgacgtccgtgaaagtctccat
attgtgtttgacaaacttcgtgacctccggattcctgtctccgacaatccagacatcacc
gtacaaaacattgtgacatctgcagatcttggagaagatttgaatcttaatgcaatcgct
attggacttggattagagaatattgaatatgagccagaacagtttcccgggcttgtatac
cgacttgataacccagctgttgtggcattattattcggatcgggaaaactcgtgattacg
ggtggaaaagagcctgatgatgcacgtgaggctgttgatgttattctctcccgattggac
gaactcggtttagctggttaa
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