KEGG   Hydrogenophaga sp. PBC: Q5W_02000
Entry
Q5W_02000         CDS       T04491                                 
Name
(GenBank) hypothetical protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
hyb  Hydrogenophaga sp. PBC
Pathway
hyb03030  DNA replication
hyb03430  Mismatch repair
hyb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hyb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Q5W_02000
   03430 Mismatch repair
    Q5W_02000
   03440 Homologous recombination
    Q5W_02000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hyb03032]
    Q5W_02000
   03400 DNA repair and recombination proteins [BR:hyb03400]
    Q5W_02000
Enzymes [BR:hyb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Q5W_02000
DNA replication proteins [BR:hyb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Q5W_02000
DNA repair and recombination proteins [BR:hyb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Q5W_02000
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: AOS77842
LinkDB
Position
398662..399315
AA seq 217 aa
MSAWWSGWFGRALDPLPAATERWVALDVETSGLDVARDRLLAIAAIGLCVDWTRGRLDVR
LGDSFEVVLRQDEVSSRDNILLHGIGAQSQRDGLEPVAALRAFEAFVGAAPLLAFHSAFD
EALIGRHVRRYLGHRLANSWVDIEHLCAVTHPQVRARSLDEWMAYFGIVCPRRPQAAADT
LAECELLQRVWPALAGECRSWRDVRTVAARRRWLASA
NT seq 654 nt   +upstreamnt  +downstreamnt
atgagcgcttggtggtcgggttggttcggccgcgcccttgacccgctcccggcggccact
gagcgctgggtggcgctggacgtggagaccagcggcttggacgtggcgcgcgaccgcctg
ttggcgatcgccgccatcgggctgtgcgtggactggacgcgcggtcggctggacgtgcgc
ctgggcgatagcttcgaggtggtgctgcgccaggacgaggtgtccagtcgcgacaacatc
ctgctgcacggcatcggcgcgcagagccagcgcgacgggctcgagccggtggcggcgctg
cgcgccttcgaggccttcgttggcgccgcgccgctgttggcgttccacagcgctttcgac
gaggccctgatcggcaggcatgtgcgccggtacctcggtcatcggctggccaattcctgg
gtggacatcgagcacctgtgcgccgtcacgcatccccaggtgcgggcgcgctcgctggac
gagtggatggcgtatttcggtatcgtctgcccgcggcggccccaggccgcggccgacacg
ctggccgaatgcgagttgttgcagcgcgtttggccggccctggcgggggagtgccgcagt
tggcgcgacgtgcggacggtggctgcgcggcgccgctggctggcgtccgcctag

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