Hydrogenophaga sp. PBC: Q5W_07935
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Entry
Q5W_07935 CDS
T04491
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
hyb
Hydrogenophaga sp. PBC
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyb03400
]
Q5W_07935
Enzymes [BR:
hyb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q5W_07935
DNA repair and recombination proteins [BR:
hyb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Q5W_07935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AOS78891
LinkDB
All DBs
Position
1695235..1697841
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AA seq
868 aa
AA seq
DB search
MGGAVQADALSCVWQAPFDGLARAAREAGVPMSRVVVLLPYAALAIEARRAWAARQRQAA
GLAPRFTTPRDWAAALAPWQPGSDDISHDMARDALVAAAWIERVVPARQDTGLRRELVAR
LVDAARQLAPLAAAQAPERRAAWAEERRAALAAAGGSASAQWESLVANLAVTWAGSSAYI
TDALWSPFAAPGADADLLLSLPGHHTDPLGEALLAHWGPRAGRLAWSAPAEAAPRVGACE
DFEAGARAAAACAIAHLNAGRAPVALIANDRLLTRRASALLVGAGVRLRDETGWKLSPTR
AAASLMALLRAADARASTDEVLDWLKLAPAFPPQAVEALERRLRQKGVARWAAVSMDWRE
ADIDAQRAELQAARPLLHWLKDTAQALERSGQWAPLQADEAGRQLIGVLRLGEGAHELDG
LGEAAAGPRGAARWSLAAFGAWVRDVLEGAVFQPTVAGAPQVIVLPLQQRLGRRVAAVVA
PGCDERHLSASPEPDSAWTAVQRELLGLPDREALARAAASAWAHLFAGAPVDALWRRHDA
GEALLPSPFIDGCHESAAESLLDPRLVAAGGTPRPRASAPALLPERLSASAYDDLRTCPY
RFFARRQLRLDEVDELDAEPDQGDLGNWLHEVLKRFHEARGDERPGEDADRAAMDALAGV
VAMEMGLGDDVQAGGFLPYRAQWPALREAYLHWLWPHEAEGWRFVAAEAEREQRAGRWTL
HGRLDRIDARRDLDENAEGDESFVIDHKTESRARTGARVKEPLEDTQLGFYAALLPARRL
RAAYLSIVDARGERDEPAKLIEQTEVLMARDAIVQGLVNDLERVAGGAAMLALGEGAACD
FCAARGLCRKDFWQPVAGDVAGDGEGEP
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
gtgggcggcgccgtgcaggcggacgcgttgtcgtgtgtgtggcaggccccgttcgacggt
ctcgcccgggcggcgcgcgaggccggcgtgccaatgtcgcgcgtggtggtgctgctgccc
tacgctgcgctggcgatcgaggcgcgccgcgcctgggccgcgcggcagcggcaggccgcg
ggcctggcgccgcgtttcaccacgccgcgcgattgggccgcggccctggcgccctggcaa
ccaggctccgacgacatcagccacgacatggcgcgcgacgcgctggtggccgccgcgtgg
atcgagcgcgtggtgcccgcgcggcaggacacgggcctgcggcgcgagctggtggcccgc
ctggtcgacgccgcgcgccaactggcgccgctggccgccgcgcaggcgcccgagcgtcgc
gcggcctgggccgaggaacgccgtgccgcgctggcggcggcgggtggctcggccagcgcg
cagtgggagtcgctggtggccaacctggccgtcacctgggcgggcagttccgcctacatc
accgacgcgctgtggtcgccctttgccgcgccgggggccgacgccgatctgctgctcagc
ctgccgggccaccacactgacccgctgggcgaagccttgctcgcccattggggcccgcgg
gccgggcggctggcctggtccgcgccggccgaggccgcgccacgcgtgggggcctgcgag
gacttcgaggccggggcgcgggccgccgccgcctgcgccatcgcgcacctcaacgccggg
cgcgcgccggtggcgctgatcgccaacgaccgcctgctcacgcgccgcgccagcgccctg
ctcgtgggcgcgggcgtgcggctgcgcgacgagacgggctggaagttgtcccccacgcgc
gccgccgccagcctgatggcgctgctgcgagcggccgacgcccgcgcgagcaccgacgag
gtgctcgactggctcaagcttgcgccggccttcccaccgcaggcggtggaggcgctggag
cgccggcttcggcagaagggcgtggcgcgctgggccgctgtgtccatggactggcgcgag
gccgacatcgacgcgcaacgcgcggaactgcaggccgcgcggcccttgctgcattggctc
aaggacaccgctcaggcgctggagcgcagcggccagtgggcgccactgcaggcggacgaa
gccggccgccagttgatcggcgtgctgcgcctgggcgagggcgcgcacgagctcgacggc
ctgggcgaagccgccgccgggccacgtggggctgcgcgctggtcgctcgcggcctttggc
gcctgggtgcgcgacgtgctggagggcgcggtgttccagcccaccgtggccggcgcgccg
caggtcatcgtgctgcccttgcagcagcgcctggggcgccgcgtggcggccgtggtggcg
ccgggttgcgacgagcgccacctgagcgccagccccgagcccgacagcgcctggaccgcc
gtgcagcgcgagctgctgggcctgcccgatcgcgaggccctggcgcgcgcggcggcctcg
gcctgggcgcacctgttcgcgggtgcgccggtggacgcgctgtggcgccgccacgatgcc
ggcgaagcgctgctgcccagccccttcatcgacggttgccatgagagcgccgccgagtcc
ctgctcgacccgcggctggtggcggcgggcggcacgccccgaccgcgcgccagcgcgcca
gcgctgctgcccgagcgcctgtcggccagcgcctacgacgacctgcgcacctgcccctac
cgcttcttcgcgcgccgccagttgcgcctggacgaggtggacgaactcgacgccgagccc
gatcagggcgacctgggcaactggctgcacgaggtgctcaagcgcttccacgaggcgcgc
ggtgatgagcgccccggcgaagacgccgaccgcgccgcgatggatgcgctggccggcgtg
gtggccatggagatgggcctgggcgatgacgtgcaggccggcgggttcctgccctaccgc
gcgcagtggcccgcgctgcgcgaggcctacctgcactggctgtggccgcacgaggccgag
ggctggcgcttcgtggcggccgaggccgagcgcgagcagcgcgcgggccgctggaccctg
cacggccgcctcgaccgcatcgacgcgcgacgcgacctggatgagaacgccgaaggcgac
gagagcttcgtcatcgaccacaagaccgagagccgcgcccgcaccggggcgcgcgtgaag
gagccgctggaggacacgcagttgggtttctacgccgcgctgctgcccgcgcggcgcctg
cgcgcggcctacctcagcatcgtcgacgcgcgcggcgagcgcgacgaaccggccaagctg
atcgagcagaccgaggtgctgatggcgcgcgacgcgatcgtgcagggcctggtgaacgac
ctcgagcgcgtggccggcggtgctgccatgctggccttgggcgagggtgcggcctgcgac
ttctgcgcggcgcgcggcctgtgccgcaaggacttctggcagccggtggcgggcgatgtg
gcaggcgatggggagggcgaaccatga
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