Hydrogenophaga sp. PBC: Q5W_16580
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Entry
Q5W_16580 CDS
T04491
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
hyb
Hydrogenophaga sp. PBC
Pathway
hyb00470
D-Amino acid metabolism
hyb00550
Peptidoglycan biosynthesis
hyb01100
Metabolic pathways
hyb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Q5W_16580
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Q5W_16580
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Q5W_16580
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyb01011
]
Q5W_16580
Enzymes [BR:
hyb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Q5W_16580
Peptidoglycan biosynthesis and degradation proteins [BR:
hyb01011
]
Precursor biosynthesis
Amino acid ligase
Q5W_16580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATPgrasp_ST
TTL
ATP-grasp
RimK
GARS_A
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
AOS80471
LinkDB
All DBs
Position
complement(3495030..3495968)
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AA seq
312 aa
AA seq
DB search
MTTMEFGKVAVLMGGRSAEREVSLMSGTGVLKALQSKGVDAHAFDPAEREMGELKREGFA
RCFIALHGRFGEDGTVQGALELLGIPYTGPGVMASAVAMDKLMTKRIWLAEGLATPAWRQ
VRSAADTRAAFEALGSPMIVKPVREGSTIGLTKVMGADQCEAAYALAAKQDPMVMCEQFI
AGDEVTCPVLGTGESARAMPVIRIVAPEGNYDYQNKYFTDDTQYLVPCGLPEGEEAAIQA
LVLKAFRTLDCRGWARADVMIDAATRKPWLLEINTSPGMTGHSLVPMSARAAGISYEDLC
VQLLATASLDNA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgatggaattcggcaaggtggccgtgctgatgggcgggcgctccgcggagcgc
gaggtctcgctcatgtcgggcaccggcgtgctcaaggcgctgcaatcgaaaggcgtggac
gcgcacgccttcgacccggccgagcgtgagatgggcgaactcaagcgcgagggcttcgcg
cgctgcttcatcgcgctgcacggccgtttcggtgaagacggcacggtgcagggcgcactg
gagctgttgggcattccctacaccggcccgggcgtgatggcctcggccgtggccatggac
aagctcatgaccaagcgcatctggctggccgagggcctggccacgccggcctggcgccag
gtgcgcagcgcggccgacacgcgcgccgccttcgaggccctgggctcgcccatgatcgtc
aagcccgtgcgcgaaggctccaccatcggcctcaccaaggtgatgggtgccgatcaatgc
gaggccgcctatgccctggccgcgaagcaggacccgatggtgatgtgcgagcaattcatc
gccggcgacgaggtcacctgcccggtgctgggcacgggcgaatcggcccgcgccatgccg
gtcatccgcatcgtggcgcccgagggcaactacgactaccagaacaagtacttcaccgac
gacacgcagtacctggtgccctgcggcctgcccgaaggcgaagaggccgccatccaggcg
ctcgtgctcaaggccttccgcaccctggactgccgcggctgggcgcgcgccgacgtgatg
atcgacgccgccacgcgcaagccctggctgctggaaatcaacacctcgcccggcatgacc
ggccactcgctggtgccgatgtcggcgcgcgcggccggcatctcctacgaggacctgtgc
gtgcaactgctggccacggccagtctggacaacgcctga
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