Hydrogenophaga sp. PBC: Q5W_24740
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Entry
Q5W_24740 CDS
T04491
Name
(GenBank) peptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
hyb
Hydrogenophaga sp. PBC
Pathway
hyb00550
Peptidoglycan biosynthesis
hyb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Q5W_24740
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hyb01002
]
Q5W_24740
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyb01011
]
Q5W_24740
Enzymes [BR:
hyb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Q5W_24740
Peptidases and inhibitors [BR:
hyb01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Q5W_24740
Peptidoglycan biosynthesis and degradation proteins [BR:
hyb01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Q5W_24740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
bPH_2
Motif
Other DBs
NCBI-ProteinID:
AOS81925
LinkDB
All DBs
Position
5182230..5183408
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AA seq
392 aa
AA seq
DB search
MTCFRSLIAGMALSLTMLAPAVAQMPQPPEIAARAYVLLDVTTGQVLASKDPDAPVEPAS
LTKLMSAYLVFDALRAGKITLTQTFGVSERAWKTPGSRMFIEPRMQVPVEDLIKGMIVQS
GNDATVALAEGVAGSVDRFVELMNQQAKALGMTATGYRNPEGLTAPGHITTARDLATLST
RLMNDFPQYVGYYSIQRYRYPGTPATNDTNRNLLLFRDPTVDGLKTGHTDAAGYCLVATA
RRPVPGLGDGPAGQRRLLSVMLGASSENARAAESQKLLNWGYTAFDTVRLLAANQPAAEP
RVWKGKSDTVKLGRVEGVIVSVPAGEGSGLKSDVVRPDPLVAPLQKGQGVGTLRVTTAAG
QPVVEVPLTVLETVEEAGIFGRAWDALRLWIQ
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgacttgtttccgctctctgatcgccggcatggcgctgtcgctgaccatgttggcaccc
gctgtggcgcagatgcctcagcctccagaaatcgccgctcgcgcctatgtgctgctggat
gtgaccaccgggcaagtgctggccagcaaagatcccgatgcgcccgtcgagcccgcttcg
ctcaccaaattgatgtcggcctatctggtgttcgacgccctgcgggcgggcaagatcacg
cttacccagaccttcggtgtgagcgagcgagcctggaaaacaccgggctcacgcatgttc
atcgagccgcgcatgcaggttcctgtcgaggacctcatcaagggcatgatcgtgcagtcg
ggcaacgatgccactgtggcgctggccgaaggggtggcaggttcggtcgatcgattcgtg
gaattgatgaatcagcaggccaaggcactgggtatgaccgctactgggtatcgcaacccg
gagggattgaccgccccggggcacatcaccacggcgcgtgacttggccacgctgtccacg
cggttgatgaatgactttcctcagtacgtcggctactactccattcagcgttaccgctac
cccggcacgcccgctaccaacgacacgaaccgcaacctgctgctgttccgcgaccctacg
gtcgatggtctgaagaccgggcacaccgatgcagcgggctattgcttggtcgccacggcg
cgtcggccggtgcctggactgggcgacgggccggctggtcaacgccgcctcctgtcggtc
atgttgggcgcctcgagcgagaacgcccgggccgctgagtcccagaagctgttgaactgg
ggttacaccgccttcgataccgtgcgcttgctcgcggccaaccagccagcggccgagccg
cgcgtctggaagggcaagtccgacacagtcaagctgggtcgtgtcgagggggtgatcgtc
tccgtgccggcgggcgagggcagtggtctgaagtccgacgtcgtgcgccccgacccgctg
gttgcacccctgcagaaggggcagggggtgggtactctgcgcgtcaccaccgctgcgggg
cagcccgtggttgaggtgccactgacggtgctcgagacggtggaggaggcgggcatcttc
ggccgcgcttgggacgccctgcgcctctggattcagtag
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