Hymenobacter oligotrophus: D3Y59_05490
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Entry
D3Y59_05490 CDS
T05656
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
hyh
Hymenobacter oligotrophus
Brite
KEGG Orthology (KO) [BR:
hyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hyh03036
]
D3Y59_05490 (xerD)
Chromosome and associated proteins [BR:
hyh03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
D3Y59_05490 (xerD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
AYA38812
UniProt:
A0A3B7R505
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Position
complement(1307681..1308580)
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AA seq
299 aa
AA seq
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MNWTLCLKQFQGYLRLEKSLSGHSVEAYVRDVDKLRQYLDLSKLPARPDQVTSRIIRDFL
AWLGELGLTATSQARTLSGLRAFYKFLLIEDLATQDPTDTVDSPKLGRKLPDTLAYEEVV
QLLDAIDLSTNEGTRNRAMLEVLYSSGLRVSELIGLRLSNIYVDQGFVRVLGKGSKERLV
PIGRDALKHLGFYLEGVRCHLDIQHGSEDIVFLNRRGGGMSRVMVFNIIKDTAAKAGIRK
TISPHTFRHSFATHLIEGGADLRAVQEMLGHESITTTEIYTHLDRDYLRQVITAFHPRS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
ttgaactggaccctttgcctgaaacagtttcagggctatctgcgcctcgaaaaatcgctt
tcgggacactccgtagaggcttacgtgcgcgacgtggacaagctgcgccagtatctcgac
ctcagcaagctgcccgcgcggcccgaccaagttaccagccgcatcatccgcgactttctg
gcgtggctgggcgaactgggcctgacggccacctcacaagcgcgcaccttatcgggcctg
cgggccttctacaagtttctgctgatcgaagacctcgccacccaagaccccaccgatacc
gtcgattcgcctaagctcggccgcaaactgcccgatacgctggcgtacgaggaggtggtg
caattgctcgatgccattgacctgagcaccaacgagggcacccgcaaccgcgccatgctg
gaggtgctgtattcctcggggttgcgtgtgtcggagctgattgggctgcggctgtcaaac
atctacgtcgaccagggctttgtgcgggtgttgggcaagggctccaaggagcgcctggtg
cccatcggccgcgacgcgctcaagcacctagggttttacctggagggcgtgcgctgccac
ctcgatattcagcacggctccgaggacattgtgtttctgaaccggcggggcggaggcatg
tcgcgggtgatggtgttcaacattattaaggatacggcagccaaagcgggcatccgcaaa
accatcagcccgcacactttccggcactcgtttgccacgcacctgattgagggcggcgcc
gatttgcgcgccgtgcaggaaatgctcggccacgaaagtatcaccaccaccgagatttac
acgcacctcgaccgcgactacctgcgccaggtaatcactgcgtttcacccgcgcagttag
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