Hymenobacter jejuensis: FHG12_01195
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Entry
FHG12_01195 CDS
T06049
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
hyj
Hymenobacter jejuensis
Brite
KEGG Orthology (KO) [BR:
hyj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
FHG12_01195
Enzymes [BR:
hyj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
FHG12_01195
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
PQQ
Motif
Other DBs
NCBI-ProteinID:
QDA62417
UniProt:
A0A5B8A5A6
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All DBs
Position
339756..341714
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AA seq
652 aa
AA seq
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MGAWGTTFLLLVAGGLTTSWAPKATLATRDQRQMERLGRGVVAVQQEKGNVFISWRLLNS
DPPNAAFNLFRQSGNRAAVQLNRQPLTKGTNWVDKTAVDHTAYTYSVRLAGASGTGKETG
NTASVWAQQFMRVPLQRPEGGTVSSGPDVSPFTYSANDASVADLDGDGEYEIILKWDPSN
SRDNGSAGLAGPVILDAYKLNGTRLWRINLGKNIRAGAHYTQFMAYDLDGDGKAEIACKT
ADGTIDGQGKSIGDAAKDYRSLTIPTDGVQVPAARDSRYGRILAGPEYFTVFNGLTGAAL
ASTAYLPARGPLDGWGGIGGNGGNDSYGNRADRFLAAVAYLDGQQPSVVMCRGYYGRSVL
AAWDWRGGKLTSRWVFDSKDAQNAFSGMGNHGLSVNDVDFDGKDEIVYGSMVVDDNGQGL
FSTGLRHGDALHVSNFDPTTPDLEAWGVHENEEKVPGHENGPGAALYDATTGKVLWGGDY
GQDAGRAMAADIDPRYLGAEVWGGSDEIGLRTIKGERIGKAPRAVNFGVWWDGDLLRELL
DRTTIDKWDYQNSQAKPLLAADAFGAASNNGTKATPCLSADLFGDWREEVIWRNTNNQDL
LIFTTTIPSPYRFVTLMQDPAYRLGVARENVGYNQPPHTSYYLGEGMDGVVK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
ttgggggcatggggcactacttttctgttgctggtagccggtgggctgaccaccagttgg
gccccgaaggctacgctcgccactcgggatcagcggcagatggaacgcttggggcggggc
gttgtggctgtacaacaggaaaaaggcaacgtattcattagctggaggttacttaattct
gatccaccgaatgcggcattcaacctctttcgccagagtggcaaccgcgccgctgttcag
ctcaatcgccagcccctgacgaaaggcacgaattgggtagacaaaacggcggtagatcac
acggcttacacgtactccgttcgcttggctggagcaagcggcacgggcaaagaaacgggc
aacaccgcttcggtctgggcacagcagtttatgcgcgtgccgctccagcgcccagagggc
ggcaccgtgagcagcggccccgacgtgagccctttcacctacagcgccaacgatgcctcc
gttgccgacctcgacggcgacggcgaatatgagatcattctgaaatgggacccgtctaat
tcgcgcgacaacggctcagcgggacttgccggccccgttattctggatgcttacaagctg
aatggcacccggctttggcgcattaacttgggcaagaatatccgcgccggcgcgcactac
acgcagtttatggcctatgacctcgacggcgacggcaaggcggagatcgcctgcaaaacc
gccgacggcaccatcgatggccaaggcaaaagcatcggcgacgcggccaaagattaccgc
tcgctcactatacccaccgacggggtgcaagtgcccgccgcgcgcgacagccgctacggc
cgcatcctggcggggccggagtactttacggtgttcaatggccttaccggggccgcgctc
gcctccacggcttacctgccagcccgcggtccgctcgacgggtggggtggcatcggcggc
aacggcggcaacgacagctacggcaaccgtgccgaccgctttctagccgccgtggcctac
ctcgacgggcagcagcccagcgtggtgatgtgccgcggctactatggccgctcagtactg
gccgcttgggactggcgcggcggaaagctcacttcccgttgggtttttgactcaaaagat
gcgcaaaatgctttctccgggatgggcaaccacgggctgagcgtcaacgacgtagatttc
gacggcaaggacgaaatcgtgtacggctcgatggtcgtcgacgacaacgggcagggcttg
ttttccaccggcctgcgccacggcgacgccctgcacgtcagcaacttcgaccccaccacg
cccgatctggaagcttggggggtgcacgaaaacgaggaaaaagtacccggccacgaaaac
ggccccggtgcggccctctacgatgccaccaccgggaaagtgctctggggcggcgactac
gggcaagatgccggccgggccatggccgccgacatcgatccgcgctacctgggggccgag
gtgtggggcggctccgatgaaattggcctgcgcacgatcaagggcgagcgcatcggcaag
gcgccgcgggctgtaaatttcggcgtgtggtgggatggcgatttgctgcgcgaattgctc
gaccgcaccaccatcgataagtgggattaccaaaatagccaggccaaacccttactggcc
gccgatgctttcggggccgcgtccaacaacggcaccaaagccacaccgtgcctcagcgcc
gacctgtttggcgactggcgcgaggaagtcatctggcgcaacaccaacaaccaggatctg
ttgatttttaccaccaccattccgtccccgtatcggttcgttacccttatgcaggacccc
gcctaccgcttgggtgtagcacgcgaaaatgtgggctacaaccagccgccgcacaccagc
tactacctgggcgaaggcatggacggagtcgttaaataa
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