Hydrogenophaga crassostreae: LPB072_00200
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Entry
LPB072_00200 CDS
T04505
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl03030
DNA replication
hyl03430
Mismatch repair
hyl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB072_00200
03430 Mismatch repair
LPB072_00200
03440 Homologous recombination
LPB072_00200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyl03032
]
LPB072_00200
03400 DNA repair and recombination proteins [BR:
hyl03400
]
LPB072_00200
Enzymes [BR:
hyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB072_00200
DNA replication proteins [BR:
hyl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB072_00200
DNA repair and recombination proteins [BR:
hyl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB072_00200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AOW15244
UniProt:
A0A167GGY4
LinkDB
All DBs
Position
38547..39185
Genome browser
AA seq
212 aa
AA seq
DB search
MVNQRMAVIDFETTGISPGLGDRATEVAIVLTEGGVVVDRFQSLMNAGAYIPAFITQLTG
ITNAMVQAAPPAETVMAEAARFVGQTPMVAHNASFDRRYWVAELTRAGIEAQQPFACTVL
LSRRVYPEAPSHKLGSLVSRFRLPQTGAAHRALADAEMAAELLAHIQNTLRMRHGVGNPD
HAFLMGLQRISKAAVVKRLAGFGEALTGAEQR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatcagcgcatggccgttatcgactttgaaaccacgggcatttcgccgggcttg
ggcgaccgcgccaccgaagtggccatcgtgctcacagagggcggtgtcgtggtggaccgc
tttcaaagcttgatgaacgcgggcgcctacataccggccttcattacccaactcacaggc
atcaccaacgccatggtgcaggccgcgccaccggccgaaacggtgatggccgaggcggca
cgcttcgtgggtcagacacccatggtggcacacaacgcctctttcgaccgccgctactgg
gtcgccgaactgacccgcgcgggcatcgaggcgcagcagccgtttgcctgtaccgttttg
ctctcgcgccgtgtctaccctgaagcgccgagccacaagctcggttcgctggtgagccgc
tttcgcctgccacagacgggcgcggcccaccgcgctttggccgacgccgaaatggccgcc
gagttgctggcccacattcaaaataccttgcgtatgcgccacggtgtgggcaatcccgac
cacgcctttctcatgggcctgcaacgcatcagcaaagcggcggtggtcaagcggctcgcc
ggctttggcgaagccctcactggagcggaacaacgatga
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