Hydrogenophaga crassostreae: LPB072_06500
Help
Entry
LPB072_06500 CDS
T04505
Name
(GenBank) RNA polymerase subunit sigma
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
hyl
Hydrogenophaga crassostreae
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyl03021
]
LPB072_06500
Transcription machinery [BR:
hyl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LPB072_06500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AOW15432
UniProt:
A0A167HB42
LinkDB
All DBs
Position
complement(1394849..1395418)
Genome browser
AA seq
189 aa
AA seq
DB search
MSSQPLQPFDHNALLQACAQGQRSALQQLYERECRFLMGVALRIVRDNAAAEDVLQDAFV
NIWNKAASFDPLRGEGRGWMCSIVRHGALDAVRSSARTVSVEEETMDALLEAGDPPESAD
MLDAFERRSTLGRLDDCMSRLDVAKRNCVLFAYIDGCTHAEIAERLNAPLGSVKAWIRRG
VASLKECMA
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttcacaaccgctccaacctttcgatcacaacgccttgctccaagcctgcgcacaa
ggccagcgcagtgctttgcagcagctgtatgaacgcgaatgccgctttctgatgggcgtg
gcattgcgcattgtgcgcgacaacgccgcggctgaagacgtcttgcaggacgcgttcgtc
aacatctggaacaaagccgccagcttcgacccgcttcgcggcgaaggccggggctggatg
tgcagcatcgtgcgccatggcgcgctggatgccgtccgctcgagcgcccgcaccgtgtcg
gtcgaagaagaaaccatggacgccctgctcgaagcgggcgacccgcccgaaagcgccgac
atgctcgatgcctttgaacgccgctccaccctgggccgcctggacgactgcatgagccgc
ctcgatgtggccaagcgcaactgcgtgctgttcgcctacatcgatggctgcacccacgcc
gagatcgccgagcggctcaacgccccgctgggctcggtcaaggcctggatacgccgcggc
gtggcctcgctcaaggagtgcatggcatga
DBGET
integrated database retrieval system
