Hymenobacter sp. APR13: N008_19300
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Entry
N008_19300 CDS
T03213
Name
(GenBank) hypothetical protein
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
hym
Hymenobacter sp. APR13
Pathway
hym00540
Lipopolysaccharide biosynthesis
hym01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
N008_19300
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hym01005
]
N008_19300
Enzymes [BR:
hym01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
N008_19300
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
N008_19300
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
N008_19300
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
N008_19300
Lipopolysaccharide biosynthesis proteins [BR:
hym01005
]
Lipid A
N008_19300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Motif
Other DBs
NCBI-ProteinID:
AII54120
UniProt:
A0A076HWF8
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All DBs
Position
4504613..4505857
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AA seq
414 aa
AA seq
DB search
MSFLYSIVLRLYAWLLQLVAPFVPKAAQWVQGRQGLLPRIQAALQAETAPLAWFHCASLG
EFEQGRPLMEAYAARFPGHKIVLTFFSPSGYEVRKNWPGAHYIFYLPLDTAANARAFLDA
VQPQLAVFVKYEFWYFFLAELQRRRITTICVSAIFRPDQLFFQPGGGFFRKILGCFTHIF
TQNQASAALLHGAGISQASVAGDTRFDTVVRTAAAQPRPLPLVDAFTDDWVPVFIIGSSW
PEDLPALTPLMRQYAAQLRFIVAPHEISETTLRLVEDVLPGQVVRYSRAEPATVAQARVL
LIDNVGLLSQLYRFGHFAYVGGAFGKGLHNTLEAAAFGLPLFFGPTYHKFQEAEDLVDLG
CAFPVTSADELLRAFGPLFHQEEARLKVQDLSLDYVHDHSGATNKIMRWLEQSN
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgtctttcctctattccattgtcctgcgcctgtatgcgtggctgctgcagctggtagcg
ccttttgtgcccaaagcggcgcaatgggtgcagggccggcaggggctgctgccccggatt
caggctgccctgcaggccgaaaccgcgccgctggcttggtttcactgcgcctcgctgggc
gagtttgagcagggccgccccctgatggaggcctacgccgcccgcttccccggccacaaa
atcgtgctgacgttcttttcgccctccggctacgaggtgcgcaaaaactggcccggtgcc
cactacatcttctacctgcctctggatacggctgccaacgcccgcgcctttctggatgcg
gtgcagccgcagctggccgtattcgtgaagtacgagttctggtatttctttctggccgag
ctgcagcggcggcgcatcaccaccatctgcgtgtcggccattttccggcccgaccagctg
tttttccagcccgggggtggttttttccggaaaatcctgggctgcttcacccacatcttc
acccagaaccaggcctcggccgccctgctgcacggcgccggcatcagccaggccagcgtg
gccggcgacacccgcttcgacacggtggtgcgcaccgccgccgctcagccccgcccgctg
cccctcgtagacgccttcaccgacgactgggtgcccgtgttcatcattggcagcagctgg
cccgaagacctgccggcactcacgccgctcatgcgccagtacgccgcgcagctccgcttc
atcgtggcgccccacgaaatcagcgaaaccactttgcggctggtggaggacgtgctgccc
ggccaggtggtgcgctactcccgcgccgagcccgccaccgtggcccaggcccgggtgctg
ctcatcgacaacgtggggctgctcagccagctgtaccggttcgggcatttcgcctacgtg
ggcggggctttcggcaagggcctgcacaacacgctggaggccgccgcctttggcctgccg
ctgttcttcggccctacttaccacaaatttcaggaagccgaagacctggtagacctgggc
tgtgccttcccggtgacatcggcagacgagctgctacgcgccttcgggccgctgtttcac
caggaagaagcccgcttgaaagtgcaggacctcagcctcgactacgtacacgaccacagc
ggcgccaccaacaaaatcatgcgctggcttgaacagagtaactga
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