KEGG   Hydrogenophaga sp. BPS33: F9K07_18535
Entry
F9K07_18535       CDS       T06379                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
hyn  Hydrogenophaga sp. BPS33
Brite
KEGG Orthology (KO) [BR:hyn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hyn03400]
    F9K07_18535
Enzymes [BR:hyn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     F9K07_18535
    5.6.2.6  RNA 3'-5' helicase
     F9K07_18535
DNA repair and recombination proteins [BR:hyn03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    F9K07_18535
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: QHE86753
UniProt: A0A6P1IW22
LinkDB
Position
3991541..3994000
AA seq 819 aa
MTRRASAAALVAWFAAQGWKPAPFQQEVWRHWQRGTSGLLVTPTGSGKTLAVLGGALLDG
LGEAAAPAPVRGRDTPPRLRLLWVTPLRALATDTAQALQAAITGVGLTWTVAKRTGDASS
RDRRLARRGQAEVLVITPESLALLLSYPDSAAPFAGLRGMVVDEWHELLGNKRGVLLQLG
LARLRALAPSAPVWGLSATLGNLEEARDVLLPHQPDAPIVRNAPRRTVTLRTLLPEAGER
FPWSGHLGLSQLERVLQLIAGARSAILFTNTRAQAELWHRALSSVWLEDPGTLALHHGSL
DVGLRQAAEQGLRDGSVRCVVATSSLDLGVDFPAVDLVLQVGSPKGIARLLQRAGRAHHR
PGAPGLIHCVPTHALELAEIAAARRAIAAGQIETRPPPRLSLDVLAQHCVTLALGAGFEA
GPLLAEVRGTHAFAALSDAQWQAVLQYIERGGQALENYPDFHRVVRDADGIYRVTARRIA
LHHRLSIGTITADGSVQVRFLRGASLGSVEESFISRLRPRDRFQFAGRTLELVAVEDMTA
YVRKARLASVAVPRWQGGRMPLSTELGAAVEAALDGPRDSPEMRRLAPLLDLQARTSALP
TPATLLVEAVHLRRGGALFVYPFAGRTVHEGMAALFALRWGRRTPNTFVYAVNDYGFALT
HQQPARVDAALLADLLSSHELMDDLREGMNLTEMARRQFREIARVAGMLTPTVPGRAQRS
LRQVQASSGLLFDVLRRYDPTHVLLAQAEREVFEAQLDISALSETFARCAARRIDLRQPD
TLTPLSFPLWAEMVRGELSTEDWAARVRRAAEELQARHG
NT seq 2460 nt   +upstreamnt  +downstreamnt
gtgacacggcgcgcctcggcggccgcgctcgtggcctggttcgccgcccagggttggaaa
cccgcgcccttccagcaagaggtctggcgccactggcaacgcggcacctcgggcctgctg
gtcacgcccacgggcagcggcaagacactggccgtgctcggcggcgccctgcttgatggc
ttgggcgaagccgccgcgccagcgccggtccggggccgcgatacaccaccgcgcctgcgc
ctgctctgggtcacgcccttgcgcgcgctcgccaccgacaccgcgcaggcgttgcaggcc
gccatcaccggcgtgggcctgacgtggaccgtcgccaaacgcactggcgatgcgagttcg
cgcgaccgccgcctggcgcgccggggtcaggccgaggtgctggtgatcacgcccgaatcg
ctcgcgctgctgctgtcctatcccgacagcgctgcgccgttcgcgggcctgcgcggcatg
gtggtcgacgaatggcacgagctgctgggcaacaagcgcggcgtgctgctgcaattgggc
ctggcgcgcctgcgtgcgctcgcgccttcggcgcccgtctggggcctgtcggccacgctg
ggcaacctggaggaagcgcgcgacgtgttgctgccccaccagcccgatgcgcccatcgtg
cgcaacgcgccgcggcgcacggtgaccctgcgcacactgctgcccgaagcgggcgagcgc
tttccctggtcgggccatctgggtttgtcgcagctggagcgcgtgctgcagctgatcgca
ggggcacgcagtgcgatcctcttcaccaacacgcgtgcgcaggccgagctgtggcaccgc
gccctgtcctcggtctggctcgaagacccgggcaccctggccctgcaccacggctcgctc
gatgtgggcttgcgccaggcggccgaacaaggtctgcgcgacggcagcgtgcgctgcgtg
gtggccacctccagcctggacctgggcgtggactttcccgccgtggacctggtgttgcag
gtcggcagccccaaaggcatcgcgcgcctgctacagcgcgccgggcgcgcccaccaccgc
ccgggtgccccgggcctcatccactgcgtgcccacgcatgcgctggagctggccgagatc
gccgcggcacgccgcgccatcgcggccggccagatcgaaacccggccaccgccacgcctc
tcgttggacgtgctggcgcaacactgcgtcacgctcgccttgggtgctggcttcgaggcc
ggccccctgctggccgaagtgcgcggcacgcatgccttcgccgcgctgagcgacgcgcaa
tggcaggccgtgctgcaatacatcgagcgcggcggccaggccctggaaaattaccccgac
ttccaccgcgtggtgcgggacgccgacggcatctaccgcgtgaccgcacgccgcatcgcc
ctgcaccatcggctctccatcggcaccatcaccgccgacgggtcggtgcaggtgcgcttt
ctgaggggcgcgtcgctgggctcggtggaagagagcttcatcagccggctgcgcccgcgc
gaccgcttccagttcgccggccgcacgctggaactggtggcggtggaagacatgaccgcc
tatgtgcgcaaggcccgccttgccagcgtggccgtgccgcgctggcaaggcgggcgcatg
ccgctgtcgaccgaactgggcgctgcggtggaagctgcgctcgatggtccgcgcgacagc
cccgaaatgcggcggctcgcacccttgctcgaccttcaggcgcgcacctcggcgctgccc
acgccagccaccttgctggtggaggccgtgcacttgcggcggggcggcgcactcttcgtg
taccccttcgcgggccgcacggtgcacgaaggcatggccgccttgttcgcactgcgctgg
ggccgccgcacgcccaacaccttcgtctatgccgtcaacgactacggcttcgcgttgacc
caccagcagcccgcgcgcgtggacgccgccctgctggccgatctgctctcctcgcacgaa
ctcatggacgatctgcgcgaaggcatgaacctcaccgagatggcgcgccgccagttccgc
gagatcgcgcgcgtggccggcatgctcacgcccaccgtgccggggcgcgcccagcgcagc
ctgcgccaggtgcaggcatccagtggcctgctgttcgacgtgttgcggcgctacgacccc
acgcacgtgttgctggcgcaggcagagcgcgaggtgttcgaggcgcagctcgacatatcg
gccttgtccgagaccttcgcgcgctgcgccgcccgccgcatcgatctgcgccaaccggac
acgctcacaccgctgtcgttcccgctctgggccgagatggtgcgcggcgaactcagcacg
gaagactgggccgcccgggtgcggcgtgccgccgaggaattgcaggcacggcatggctga

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