Hydrogenophaga sp. BPS33: F9K07_21495
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Entry
F9K07_21495 CDS
T06379
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
hyn
Hydrogenophaga sp. BPS33
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyn03019
]
F9K07_21495
03009 Ribosome biogenesis [BR:
hyn03009
]
F9K07_21495
Messenger RNA biogenesis [BR:
hyn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
F9K07_21495
Ribosome biogenesis [BR:
hyn03009
]
Eukaryotic type
Pre-60S particles
RNases
F9K07_21495
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Ortholog
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GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
QHE87287
UniProt:
A0A6P1J4A9
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Position
complement(4688935..4689540)
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AA seq
201 aa
AA seq
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MTSSPPPASAAVETPSSDIPTLARSDQNLVWLDCEMSGLDPEKERLLEIAVVITGPQLTP
RVEGPVIVLHQSDAVLNAMDAWNKGTHGRSGLIDKVKASTVDEEQATAELLAFIGRYVPK
NSSPMCGNTISQDRRFLVKYMPKLEAYFHYRCLDVSTLKELAKRWRPEVYDAFKKHQRHT
ALADVHESIDELEHYRTHFLR
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgacttcttctccccccccggccagcgcggccgttgaaaccccctccagcgacatccct
acactggccaggagcgaccagaacctggtgtggctcgactgcgagatgagcggcctggac
cccgaaaaagaacgcttgctggaaatcgcagtggtcatcaccggtccgcagctcacgccg
cgcgtggaagggccggtgatcgtgctgcaccagagcgacgccgtgctcaacgccatggac
gcctggaacaagggcacgcatggaaggagcggtctgatcgacaaggtcaaggccagcacg
gtggacgaagaacaggccacggccgagttgttggcgttcattggccggtacgtgcccaag
aacagttcgcccatgtgcggcaacactatcagccaggaccgccgtttcctggtgaagtac
atgcccaagctggaggcctatttccactaccgctgcctggacgtgagcacgctcaaggag
ctggccaagcgctggcggcccgaggtgtacgacgcgttcaagaagcaccagcggcacacc
gccctggcggacgtgcacgagtcgatcgacgagctcgagcactaccgtacccatttcctg
cgctga
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