Hymenobacter sp. PAMC 26628: AXW84_12180
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Entry
AXW84_12180 CDS
T04961
Name
(GenBank) hypothetical protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hyz
Hymenobacter sp. PAMC 26628
Brite
KEGG Orthology (KO) [BR:
hyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyz03400
]
AXW84_12180
Enzymes [BR:
hyz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AXW84_12180
DNA repair and recombination proteins [BR:
hyz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AXW84_12180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
AMJ66103
UniProt:
A0A126PB17
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All DBs
Position
2766060..2769461
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AA seq
1133 aa
AA seq
DB search
MSTPAASPSFRIYSSSAGSGKTYQLTKEYLTLALSSEDPAYFKRVLAITFTRDAAGEMKE
RIVGALRRFAYPEAGGKPDALLTDVAAALGLGPDAVRRRAAATFRLVLYHYADFAVSTID
AFVQRIVTAFTRELDLPASFEVELDTDSVLQSAVAALLDKVNRNADTRLLSATLADYALG
RADEGKSWSRLPEELATFGRALFNETVQEAVTELGKLDLADFRRIDKELRARRLEIEAAF
TQAQEAAVAVLDEAGALEGDFYQGKRGIFGYVQKGTELLAPGAGPNSYVQATLAEDKWYS
GKIKTATDRARVDAVKEPLRQLVAALDTLRANYLPNYILLTAMQPYLFHASLLSELNKLV
EQISRERNVVLISEFNRRIAAIVLTEPVPFLYERLGEKYEHLLIDEFQDTSVLQWNNLLP
LVENTLANGFDSLAVGDAKQSIYRWRGGEMEQILRLHQGNTGPLAERAREPEMRELLRLR
YETVGPALKAEALQINYRSAREIIEFNNSFFAAVSARHADLPLVQGIYDAYFGQQVPAGA
PSGRPGHVELLFTQKDAPAQQYDAAAGAHTGAPLPGHAPGATLTYEESTCYLALALVEQA
LANGYALADVAVLCRTRQASKIMAKFLKERGYAIISADSLALEFAEVVNLLISIFRVLHQ
PADTLARAEALLLVDKVVRQEAPTPARVRHLADIANQAHAKPFFDELRALGYDVQEDETG
NLGLYELAERLIDLFGLLGRNGESDYLFRFLDLTLEFSLRHGNNLGNFLADWEGRKGRVS
INAPGGRAAITITTVHKAKGLAYGVVIVPFADWSLEPHRNTLLWGHLAADEKPLPGLPEV
AVVGLNATLQQTALGGQYAEEREKTFLEGLNTLYVAFTRPRHRLYVLSKRPEAKKAAKAT
LETEEPTGPLATARTVADLLHGYLQGLGQWQDEQVAFVLSQGSDAPLLPGGPAPAARTYA
LTNLGAAPWEERLQLRRHATTVFDFDEQQRLSEWNRKLHYGLRRLVAAADVPRVAGQLVA
EGIISAKERDELAARLGRIVADPRLAPYFAEHLSVETEREILLGGVQVRPYRPDRVVLDR
TGRRVTLLDFRLPPPQYAHRQALRNYATLFEQLGYEQVRGLIYYFQTEEIVTV
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacaccggcagcgtccccctccttccgcatttattcttcctcggccggctcgggc
aaaacctaccagcttaccaaagaatacctcaccctcgccctcagttccgaagaccccgcg
tacttcaagcgtgtgctggccatcaccttcacccgcgacgcggccggcgaaatgaaggag
cgcattgtgggggccctgcgccgcttcgcctaccccgaagccggcggcaagcccgacgcg
ctgctcaccgacgtggccgccgccctgggcttggggcccgacgcggtgcggcgccgggcg
gcggccactttccggctcgtgctctaccactacgccgattttgcggtgagcaccatcgat
gcctttgtgcagcgcatcgtcacggccttcacccgcgagttggatttgccggccagcttc
gaggtggaactcgacaccgacagcgtgctgcaaagcgccgtggcggccctgctcgacaag
gtgaaccgcaacgccgacacccggctgctctcggccacgctggccgactacgccctgggc
cgcgccgacgagggcaagagttggagccgcctgcccgaggagctggccacctttggccgc
gccctgttcaacgaaaccgtgcaggaggccgtgacggagctgggcaagctggatttggct
gatttccggcgcatcgacaaagaattgcgggcccggcggctcgaaatcgaggccgctttc
acccaggcccaggaggccgccgtggccgtgctcgacgaggccggggccctggagggggac
ttttaccagggcaagcgcggcatttttggctacgtgcaaaaaggcaccgaactgctagcc
cccggcgcgggccccaacagctacgtgcaggccacgctggccgaggacaagtggtacagc
ggcaaaataaaaaccgccaccgaccgcgcccgcgtcgacgccgtgaaggagccgctgcgc
caattagtcgcggcgctcgacacgctgcgggctaattatttgccgaattatattttgctc
acggccatgcagccgtatttattccacgcctcgctgctgagcgaattaaataaattggtg
gagcaaatcagccgcgagcgcaacgtggtattaatttccgaattcaaccgccgcattgcc
gccattgtgctcaccgagccggtgccttttttgtacgagcggctgggtgagaaatacgag
cacttattaattgacgaattccaggacacgtcggttttgcagtggaacaacctgctgccg
ctggtggaaaacacgctcgccaacggcttcgacagcctggccgtgggcgacgccaagcaa
tccatctaccgctggcgcggcggcgagatggagcagattctgcgcctgcaccagggcaac
acggggcccctagccgagcgtgcccgcgagcccgaaatgcgcgagctgctgcgcctgcgc
tacgaaaccgtgggacccgcgctaaaggccgaagccctgcaaattaattaccgctcggcc
cgcgaaatcattgagtttaataattcctttttcgccgcggtaagcgcgcgccacgccgac
ttgccgctggtgcagggcatttatgacgcgtactttgggcagcaggtgcccgctggggcc
cccagcggccggccggggcacgtcgaattattatttacccagaaggacgcgcccgcccag
cagtacgacgccgcggcgggggcccacaccggcgcgccgctgcccggccatgcccccggc
gccacgctcacctacgaggaaagcacctgctacctggccctggccctggtggagcaggcc
ctggccaacggctacgcgctggccgacgtggcggtgctgtgccgcacgcgccaagccagc
aagatcatggccaagttcctgaaagagcgaggctacgccatcatttcggccgactcgctg
gcgctggaatttgccgaggtggtgaatttactcattagcattttccgggtactgcaccag
ccggccgataccttggcccgggccgaggcgctgctgctcgtcgacaaagtggtgcggcag
gaggcccccacgccggcccgcgtgcgccacctggccgacattgccaaccaagcgcacgcc
aagccgtttttcgacgagctgcgggctctgggctacgacgtgcaggaggacgaaaccggc
aacctgggcctgtatgagctggccgagcggctcatcgacctgtttggcctgctggggcgc
aacggcgagagcgactatctgtttcgcttcctcgacctgacgctggaattcagcctgcgc
cacggcaacaacctgggcaacttcctggccgattgggaggggcgcaagggccgcgtgagc
atcaacgcgccgggcgggcgggcggccatcaccatcaccaccgtgcacaaggccaagggt
ttggcctacggcgtggtcatcgtgccttttgccgactggagcctggagccgcaccgcaac
actttactctggggccacctggcggccgacgagaagccactgcccggcctgcccgaagtg
gccgtggtgggcctaaacgccactttgcagcaaaccgcgctgggcggccagtacgccgaa
gagcgcgaaaaaaccttcctcgaagggctaaatacgctgtacgtggctttcacccggccc
cgccaccggctgtacgtgctcagcaagcggcccgaggccaagaaagccgccaaggccacc
ctggaaaccgaggagccgacggggcccctggccacggcccgcaccgtggccgacctgctg
cacggctacttgcagggcttgggccagtggcaggacgagcaagtagcgtttgtgttatcc
caaggcagcgatgcccccctgctgcccgggggccccgcgccggccgcccgcacctacgcc
ctcaccaacctgggggcggcgccctgggaggagcgcctgcaactgcgccgccacgccacc
acggtgttcgattttgacgagcagcagcgcctgagcgagtggaaccgcaagctgcactac
ggcctgcgccgcctcgtcgccgcggccgacgtgccccgcgtggctgggcaactggtggcc
gagggcatcatcagcgccaaggagcgcgacgagctggccgcccgcctgggccgcatcgtg
gccgacccgcgcctggcgccctacttcgccgaacacctgagcgtagaaacggagcgcgaa
atcctgctcggcggcgtgcaggtgcgcccctaccggcccgaccgggtggtgctcgaccgc
acgggccgccgcgtgacgctgctcgatttccggctgcccccgccgcagtacgcccaccgc
caggccctgcgcaactacgccacgctgttcgagcagttgggctatgagcaggtgcggggc
ctcatttattatttccaaaccgaggaaatcgtgacggtgtag
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