Intrasporangium calvum: Intca_3277
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Entry
Intca_3277 CDS
T01385
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ica
Intrasporangium calvum
Pathway
ica03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Intca_3277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ica03400
]
Intca_3277
Enzymes [BR:
ica01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Intca_3277
DNA repair and recombination proteins [BR:
ica03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Intca_3277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ADU49760
UniProt:
E6SDS9
LinkDB
All DBs
Position
3615121..3615912
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AA seq
263 aa
AA seq
DB search
MRIATWNVNSIRSRVDRVTDWLVRSDVDVLALQETKAREDQFPHDRFRELGYEVAHHGLS
QWNGVAIVSRVGIEDVRVGFDGMPGWGDPAAAEARAIGALCGGVRIWSLYIPNGRTLEDP
HLLYKLDWLAALADAGRSWLADDPSAPIALLGDWNIAPFDEDVWSVPFYEGRTHTSPRER
AAFQAVVDAGFADVVRPHCPGPGVYTYWDYVQLRFQKGRGMRIDFALCSPALARRVTGAA
IDREARKGKGASDHAPVVFEIED
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtgcggatcgccacctggaacgtcaactccatcaggtcccgggtcgaccgggtcaccgac
tggctcgtccggagcgacgtcgacgtcctcgccctgcaggagaccaaggcgcgcgaggac
cagttcccgcacgaccggttccgggagctgggctacgaggtggcccaccacggactgtcc
cagtggaacggggtggccatcgtgtcgcgcgtcgggatcgaggacgtgcgggtcggcttc
gacgggatgcccggctggggagaccccgccgccgccgaggcgcgcgcgatcggcgcgctc
tgcggtggagtgcggatctggtcgctctacatccccaacggccgcaccctcgaggacccg
cacctgctctacaagctcgactggctggccgcgctcgccgacgcaggccgctcgtggctc
gccgacgacccgagtgcgccgatcgcgctgctcggcgactggaacatcgcccccttcgac
gaggacgtgtggagcgtgccgttctacgaggggcgcacgcacacgtcgcctcgcgagcga
gctgccttccaggccgtcgtggacgccgggttcgccgatgtcgtccggccgcactgcccg
ggccccggggtctacacgtactgggactacgtccagctccgcttccagaagggccgcggg
atgcgcatcgacttcgcgctgtgctcacccgcgctcgcccggcgggtgaccggcgcagcg
atcgaccgcgaggcgcgcaagggcaagggcgccagcgaccacgcgccggtggtcttcgag
atcgaggactga
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integrated database retrieval system
